DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir76b and Ir25a

DIOPT Version :9

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001260049.1 Gene:Ir25a / 33683 FlyBaseID:FBgn0031634 Length:947 Species:Drosophila melanogaster


Alignment Length:553 Identity:111/553 - (20%)
Similarity:205/553 - (37%) Gaps:114/553 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 TNLIQMGENGTLSPVTELPMDVDA-SEAGFDADAPVETLETINRKKPKLREMLDWIGG------- 82
            |.:.:....||...||:.....:. |...|:.|  :..|:.........:.:..||.|       
  Fly   364 TKITEPTSYGTFDLVTQSTQPFNGHSFMKFEMD--INVLQIRGGSSVNSKSIGKWISGLNSELIV 426

  Fly    83 ------KHL------RIATLEDFPLSYTEVLENGTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDN 135
                  |:|      ||.|:...|....:  |...:...|....:|:.:....:|.|.:...:|.
  Fly   427 KDEEQMKNLTADTVYRIFTVVQAPFIMRD--ETAPKGYKGYCIDLINEIAAIVHFDYTIQEVEDG 489

  Fly   136 IIGSPSDFDR--SLIEMVNSSTVDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQRPRESASG 198
            ..|:..:..:  .:::.:.....|:....:..::::...:.::....|.....::||||...:|.
  Fly   490 KFGNMDENGQWNGIVKKLMDKQADIGLGSMSVMAEREIVIDFTVPYYDLVGITIMMQRPSSPSSL 554

  Fly   199 SGLLAPFEFWVWILILVSLLAVGPII--------YALIILRNRLTGDGQQTPYSLGHCAWFVYGA 255
            ...|...|..||:.||.:......::        |:....|.:...|.::..::|..|.||...:
  Fly   555 FKFLTVLETNVWLCILAAYFFTSFLMWIFDRWSPYSYQNNREKYKDDEEKREFNLKECLWFCMTS 619

  Fly   256 LMKQGSTLSPIADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNTVNDILTKNKHFVS 320
            |..||...:|...|.||:.||||:|..|:.:.|||||.||||:|:...|..:::|:..:.|...:
  Fly   620 LTPQGGGEAPKNLSGRLVAATWWLFGFIIIASYTANLAAFLTVSRLDTPVESLDDLAKQYKILYA 684

  Fly   321 MRGG--GVEYAIRTTN---------ESLSM---LNRMIQNNYAVFSDETNDTY------------ 359
            ...|  .:.|..|.:|         :.||:   |..:.::..||:....:|.|            
  Fly   685 PLNGSSAMTYFERMSNIEQMFYEIWKDLSLNDSLTAVERSKLAVWDYPVSDKYTKMWQAMQEAKL 749

  Fly   360 ---------NLQNYVEKNGYVFVRDRPAINIMLYRDYLYRKTVSFSDEKVHCPFAMAKEPFLKKK 415
                     .::|.....|:.|:.|...|.      ||         :..:|...:..|.|.:|.
  Fly   750 PATLDEAVARVRNSTAATGFAFLGDATDIR------YL---------QLTNCDLQVVGEEFSRKP 799

  Fly   416 RTFAYPIGSNLSQLFDPELLHLVESGIVKHLSKRNLPSAE--------------ICPQDLGGTER 466
            ...|...||:|...|:..:|.|:....::.|.::...:.|              |..|::||   
  Fly   800 YAIAVQQGSHLKDQFNNAILTLLNKRQLEKLKEKWWKNDEALAKCDKPEDQSDGISIQNIGG--- 861

  Fly   467 QLRNGDLMMTYYIMLAGFATALAVFSTELMFRY 499
                     .:.::..|...|...    |:|.|
  Fly   862 ---------VFIVIFVGIGMACIT----LVFEY 881

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 87/404 (22%)
Ir25aNP_001260049.1 PBP1_iGluR_AMPA_Like 40..426 CDD:107378 12/63 (19%)
PBP2_iGluR_putative 438..836 CDD:270435 87/414 (21%)
Lig_chan 565..870 CDD:278489 72/331 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45462925
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR18966
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.840

Return to query results.
Submit another query.