DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir76b and GRIN2A

DIOPT Version :9

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_016878661.1 Gene:GRIN2A / 2903 HGNCID:4585 Length:1516 Species:Homo sapiens


Alignment Length:492 Identity:105/492 - (21%)
Similarity:183/492 - (37%) Gaps:133/492 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 HLRIATLEDFPLSYTEVLE--------------------NGTRVG-------HGVSFQIIDFLKK 121
            ||.|.|||:.|....|.::                    |.|..|       .|....|:..|.:
Human   457 HLSIVTLEEAPFVIVEDIDPLTETCVRNTVPCRKFVKINNSTNEGMNVKKCCKGFCIDILKKLSR 521

  Fly   122 KFNFTYEVVVPQDNIIGSPSD--FDRSLIEMVNSSTVDLAAAFIPSLSDQRS-FVYYSTTTLDEG 183
            ...|||::.:..:...|...:  ::..:.|:|....|....:.  :::::|| .|.:|...::.|
Human   522 TVKFTYDLYLVTNGKHGKKVNNVWNGMIGEVVYQRAVMAVGSL--TINEERSEVVDFSVPFVETG 584

  Fly   184 EWIMVMQRPRESASGSGLLAPFEFWVWILILVSLLAVGPIIYALIIL---------RNRLTGDGQ 239
            ..:|| .|...:.|.|..|.||...||:::.|.||.|..|  |:.:.         ||...|...
Human   585 ISVMV-SRSNGTVSPSAFLEPFSASVWVMMFVMLLIVSAI--AVFVFEYFSPVGYNRNLAKGKAP 646

  Fly   240 QTP-YSLGHCAWFVYGALMKQGSTL-SPIADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFT 302
            ..| :::|...|.::|.:......: :|...:::::.:.|..|..|..:.|||||.||:...:|.
Human   647 HGPSFTIGKAIWLLWGLVFNNSVPVQNPKGTTSKIMVSVWAFFAVIFLASYTANLAAFMIQEEFV 711

  Fly   303 LPYNTVNDILTKNKH-------FVSMRGGGVEYAIRTTNESLSMLNRMIQNNYAVFSDETNDTYN 360
            .....::|...:..|       |.::..|..|              |.|:|||. :..:....:|
Human   712 DQVTGLSDKKFQRPHDYSPPFRFGTVPNGSTE--------------RNIRNNYP-YMHQYMTKFN 761

  Fly   361 LQNYVE------KNGYV--FVRDRPAINIMLYRD-----------YLYRKTVSFSDEKVHCPFAM 406
             |..||      |.|.:  |:.|...:|....||           |::..|          .:.:
Human   762 -QKGVEDALVSLKTGKLDAFIYDAAVLNYKAGRDEGCKLVTIGSGYIFATT----------GYGI 815

  Fly   407 AKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVESGIVK-----------HLSKRNLPSAEICPQD 460
            |    |:|        ||...:..|..||..|..|.::           |..|..:.|:::...:
Human   816 A----LQK--------GSPWKRQIDLALLQFVGDGEMEELETLWLTGICHNEKNEVMSSQLDIDN 868

  Fly   461 LGGTERQLRNGDLMMTYYIMLAGFATALAVFSTELMF 497
            :.|            .:|::.|..|.:|..|..|.:|
Human   869 MAG------------VFYMLAAAMALSLITFIWEHLF 893

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 92/419 (22%)
GRIN2AXP_016878661.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155985
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

Return to query results.
Submit another query.