DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir76b and GRIK5

DIOPT Version :9

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_011525167.1 Gene:GRIK5 / 2901 HGNCID:4583 Length:982 Species:Homo sapiens


Alignment Length:510 Identity:117/510 - (22%)
Similarity:198/510 - (38%) Gaps:78/510 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 TLETINRKKPKLREMLDWIGGKHLRI-ATLEDFPLS---------YTEVLEN------------- 103
            ||..:.:.:...||:..|...:.|.: ||..|..||         .|.:|||             
Human   374 TLRILEKSRQGHREIGVWYSNRTLAMNATTLDINLSQTLANKTLVVTTILENPYVMRRPNFQALS 438

  Fly   104 GTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDNIIGSP---SDFDRSLIEMVNSSTVDLAAAFIPS 165
            |.....|....::..|.:...|.|.:.:.:|.:.|:|   ..:...:.|::|....|||.|....
Human   439 GNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQKADLAVAAFTI 503

  Fly   166 LSDQRSFVYYSTTTLDEGEWIMVMQRPRESASGSGLLAPFEFWVWILILVSLLAVGPIIYALIIL 230
            .:::...:.:|...:..|..|:..............|.||...||:.:|::.|||..:::    |
Human   504 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLF----L 564

  Fly   231 RNRLTGDGQQTP--------------YSLGHCAWFVYGALMKQGSTLSPIADSTRLLFATWWIFI 281
            ..||:......|              |:||:..||..|..|:|||.:.|.|.|||.:...||.|.
Human   565 AARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFT 629

  Fly   282 TILTSFYTANLTAFLTLSKFTLPYNTVNDILTKNKHFVSMRGGGVEYAIRTTNESLSMLNRMIQN 346
            .|:.|.|||||.||||:.:..:|..:.:|:..:.         .:||.......:::.       
Human   630 LIIISSYTANLAAFLTVQRMEVPVESADDLADQT---------NIEYGTIHAGSTMTF------- 678

  Fly   347 NYAVFSDETNDTY-NLQNYVE-KNGYVFVRD-RPAINIMLYRDY--LYRKTVSFSDEKVHCPFAM 406
                |.:....|| .:.||:: |...|||:. ...|..:|...|  |...|::....:::|....
Human   679 ----FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQ 739

  Fly   407 AKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVESGIVKHLSKRNLPSAEICPQDLGGTERQLRNG 471
            .......|......|:||.........:|.|.|:..::.| ||.......||::.....:.|...
Human   740 IGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEIL-KRKWWEGGRCPKEEDHRAKGLGME 803

  Fly   472 DLMMTYYIMLAGFATALAVFSTELMFRYVNSRQEANKWARH-------GIG-RTP 518
            ::...:.:::.|...|:.|...|.::....|.:.....|.|       .:| |||
Human   804 NIGGIFIVLICGLIIAVFVAVMEFIWSTRRSAESEETPALHPAACQCSALGPRTP 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 93/398 (23%)
GRIK5XP_011525167.1 PBP1_iGluR_Kainate_KA1_2 25..399 CDD:107389 6/24 (25%)
ANF_receptor 42..379 CDD:279440 2/4 (50%)
Periplasmic_Binding_Protein_Type_2 414..785 CDD:304360 92/395 (23%)
Lig_chan 546..816 CDD:278489 71/294 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156009
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.840

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