DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir76b and GRIK4

DIOPT Version :10

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_055434.2 Gene:GRIK4 / 2900 HGNCID:4582 Length:956 Species:Homo sapiens


Alignment Length:556 Identity:137/556 - (24%)
Similarity:218/556 - (39%) Gaps:105/556 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    89 TLEDFPLSYTEVLEN-------------GTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDNIIGSP 140
            ||.:..|..|.:|||             |.....|....::..|.:...|.|::.:..|.:.|.|
Human   412 TLFNTTLVVTTILENPYLMLKGNHQEMEGNDRYEGFCVDMLKELAEILRFNYKIRLVGDGVYGVP 476

  Fly   141 SDFDRSLIEMVN---SSTVDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQRPRESASGSGLL 202
             :.:.:...||.   :...|||.|.:...:::...:.:|...:..|..|:..............|
Human   477 -EANGTWTGMVGELIARKADLAVAGLTITAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFL 540

  Fly   203 APFEFWVWILILVSLLAVGPIIYALIILRNRLTGDGQQTP--------------YSLGHCAWFVY 253
            .||...||:.:|::.|||..:::    |..|||.....:|              ||||:..||..
Human   541 DPFSPGVWLFMLLAYLAVSCVLF----LVARLTPYEWYSPHPCAQGRCNLLVNQYSLGNSLWFPV 601

  Fly   254 GALMKQGSTLSPIADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNTVNDILTKNKHF 318
            |..|:||||::|.|.|||.:...||.|..|:.|.|||||.||||:.:..:|..:|:|:..:.   
Human   602 GGFMQQGSTIAPRALSTRCVSGVWWAFTLIIISSYTANLAAFLTVQRMDVPIESVDDLADQT--- 663

  Fly   319 VSMRGGGVEYAIRTTNESLSMLNRMIQNNYAVFSDETNDTY-NLQNYV-EKNGYVFVRD-RPAIN 380
                  .:||.  |.:...||         ..|.:....|| .:.||: .|...|||:. ...|.
Human   664 ------AIEYG--TIHGGSSM---------TFFQNSRYQTYQRMWNYMYSKQPSVFVKSTEEGIA 711

  Fly   381 IMLYRDY--LYRKTVSFSDEKVHCPFAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVESGIV 443
            .:|..:|  |...|::....:.:|...........|......|:||.....||..:|.|.|:..:
Human   712 RVLNSNYAFLLESTMNEYYRQRNCNLTQIGGLLDTKGYGIGMPVGSVFRDEFDLAILQLQENNRL 776

  Fly   444 KHLSKRNLPSAEICPQDLGGTERQLRNGDLMMTYYIMLAGFATALAVFSTELMFRYVNSRQEANK 508
            :.| ||.......||::.....:.|...::...:.:::.|.  .:|:|...|.|.:.....||.:
Human   777 EIL-KRKWWEGGKCPKEEDHRAKGLGMENIGGIFVVLICGL--IVAIFMAMLEFLWTLRHSEATE 838

  Fly   509 WA--RHGIGRTPN----GQSVAPSRWLRGWRRLNSGHGQLLGASTHGQNVTPPPPYQSIFNGGSH 567
            .:  :..:....:    ..|:.|.|     ||               ..|.||.|          
Human   839 VSVCQEMVTELRSIILCQDSIHPRR-----RR---------------AAVPPPRP---------- 873

  Fly   568 GDPLNRWRRPLANGNA-LGNGVLLG-GDSEGGVRRL 601
              |:...|||  .|.| |.||.|.| |:.:...:||
Human   874 --PIPEERRP--RGTATLSNGKLCGAGEPDQLAQRL 905

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Lig_chan-Glu_bd 83..192 CDD:463166 24/118 (20%)
Lig_chan 209..458 CDD:459656 77/267 (29%)
GRIK4NP_055434.2 PBP1_iGluR_Kainate_KA1_2 24..402 CDD:380616
PBP2_iGluR_kainate_KA1 415..785 CDD:270442 102/395 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 863..889 14/59 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 931..956
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.