DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and GRIK3

DIOPT Version :9

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_000822.2 Gene:GRIK3 / 2899 HGNCID:4581 Length:919 Species:Homo sapiens


Alignment Length:541 Identity:109/541 - (20%)
Similarity:204/541 - (37%) Gaps:151/541 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 NGTLSPVTELPMD-VDASEAGFD---ADAPVETLETINRKKPKLREMLDWIGGKHLRIATLEDFP 94
            |.|....|:..:| :...|.|.:   ..:|.:.|......|.:...:.|.:..:.|.:.|:.:.|
Human   381 NKTSGLRTDFDLDIISLKEDGLEKVGVWSPADGLNITEVAKGRGPNVTDSLTNRSLIVTTVLEEP 445

  Fly    95 LSYTEVLENGTRVGHGVS-FQ--IIDFLKKK---FNFTYEVVVPQDNIIGSPSDFDR--SLIEMV 151
            .   .:.....|..:|.. |:  .||.||:.   ..|:||:.:.:|...|:..|..:  .:::.:
Human   446 F---VMFRKSDRTLYGNDRFEGYCIDLLKELAHILGFSYEIRLVEDGKYGAQDDKGQWNGMVKEL 507

  Fly   152 NSSTVDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQRPRESASGSGLLAPFEFWVWILILVS 216
            .....|||.|.:.....:...:.:|...:..|..|:..:....:.|....|.|....:|:.:|::
Human   508 IDHKADLAVAPLTITHVREKAIDFSKPFMTLGVSILYRKPNGTNPSVFSFLNPLSPDIWMYVLLA 572

  Fly   217 LLAVGPIIYALI------------------ILRNRLTGDGQQTPYSLGHCAWFVYGALMKQGSTL 263
            .|.|..:::.:.                  ::.|..|         |.:..||..|:||:|||.|
Human   573 YLGVSCVLFVIARFSPYEWYDAHPCNPGSEVVENNFT---------LLNSFWFGMGSLMQQGSEL 628

  Fly   264 SPIADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNTVNDILTKNKHFVSMRGGGVEY 328
            .|.|.|||::...||.|..|:.|.|||||.||||:.:...|.::.:|:..:.|         :||
Human   629 MPKALSTRIIGGIWWFFTLIIISSYTANLAAFLTVERMESPIDSADDLAKQTK---------IEY 684

  Fly   329 -AIR-------------TTNESL-----SMLNRMIQNN-----------YAVFSDETNDTYNLQ- 362
             |::             :|.|.:     |..:.:::||           ||:..:.|...|..| 
Human   685 GAVKDGATMTFFKKSKISTFEKMWAFMSSKPSALVKNNEEGIQRALTADYALLMESTTIEYVTQR 749

  Fly   363 --------NYVEKNGYVF-------VRDRPAINIMLYRDYLYRKTVSFSDEKVHCPFAMAKEPFL 412
                    ..::..||..       .||:..|.|:..::          ::|:|    :.||.:.
Human   750 NCNLTQIGGLIDSKGYGIGTPMGSPYRDKITIAILQLQE----------EDKLH----IMKEKWW 800

  Fly   413 KKKRTFAYPIGSNLSQLFDPELLHLVESGIVKHLSKRNLPSAEICPQDLGGTERQLRNGDLMMTY 477
            :         ||..     ||              :.|..::.:..|.:||            .:
Human   801 R---------GSGC-----PE--------------EENKEASALGIQKIGG------------IF 825

  Fly   478 YIMLAGFATALAVFSTELMFR 498
            .::.||...::.|...|.:::
Human   826 IVLAAGLVLSVLVAVGEFVYK 846

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 91/425 (21%)
GRIK3NP_000822.2 PBP1_iGluR_Kainate_GluR5_7 34..417 CDD:107388 8/35 (23%)
ANF_receptor 55..398 CDD:279440 4/16 (25%)
PBP2_iGluR_Kainate_GluR7 433..801 CDD:270441 87/402 (22%)
Lig_chan 564..832 CDD:278489 70/339 (21%)
Glutamate binding. /evidence=ECO:0000250 690..692 0/1 (0%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165155999
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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