DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir76b and GRID1

DIOPT Version :10

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_060021.1 Gene:GRID1 / 2894 HGNCID:4575 Length:1009 Species:Homo sapiens


Alignment Length:620 Identity:152/620 - (24%)
Similarity:245/620 - (39%) Gaps:119/620 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 REMLDWIGGKHLRIATL--EDFPLSYTEVLENGTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDNI 136
            |.|...:.|..|::.|:  |.|.:....:|....|. .|.|..::|.|.|...|.||:....|..
Human   428 RPMGSRLQGLTLKVVTVLEEPFVMVAENILGQPKRY-KGFSIDVLDALAKALGFKYEIYQAPDGR 491

  Fly   137 IGSP---SDFDRSLIEMVNSSTVDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQRPRESASG 198
            .|..   :.::..:.|:: |...|||.:.|....::.|.|.:|...:|....|:: ::|.|..|.
Human   492 YGHQLHNTSWNGMIGELI-SKRADLAISAITITPERESVVDFSKRYMDYSVGILI-KKPEEKISI 554

  Fly   199 SGLLAPFEFWVWILILVSLLAVGPIIYALIILRNRLTGDGQQT--------PYSLGHCAWFVYGA 255
            ..|.|||:|.||..|..::..||.:|:.|    ||:.....|:        ..:|....|.||||
Human   555 FSLFAPFDFAVWACIAAAIPVVGVLIFVL----NRIQAVRAQSAAQPRPSASATLHSAIWIVYGA 615

  Fly   256 LMKQGSTLSPIADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNTVNDILTKNKHFVS 320
            .::||...|..:.:.|::..:||:|..|:.|.|||||.||||:|:...|..|..| |:|.   |.
Human   616 FVQQGGESSVNSMAMRIVMGSWWLFTLIVCSSYTANLAAFLTVSRMDNPIRTFQD-LSKQ---VE 676

  Fly   321 MRGGGVE-------YAIRTTN-----ESLSMLNRMIQNNYAVFSDETNDTYNLQNYVEKNGYVFV 373
            |..|.|.       :..:.||     .:.:.|.|.|..|....:..::.:..::. .:|..|.|:
Human   677 MSYGTVRDSAVYEYFRAKGTNPLEQDSTFAELWRTISKNGGADNCVSSPSEGIRK-AKKGNYAFL 740

  Fly   374 RDRPAINIMLYRDYLYRKTVSFSDEKVHCPFAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHLV 438
            .|   :.::.|        .:.:|:  .|...:.......|....|...||....||...:|.|.
Human   741 WD---VAVVEY--------AALTDD--DCSVTVIGNSISSKGYGIALQHGSPYRDLFSQRILELQ 792

  Fly   439 ESG---IVK-----HLSKRNLPSAEICPQDLGGTERQLRNGDLMMTYYIMLAGFATALAVFSTEL 495
            ::|   ::|     |:.:.:|.|......|    .:.|:.......:.|:..|...|..|.:.||
Human   793 DTGDLDVLKQKWWPHMGRCDLTSHASAQAD----GKSLKLHSFAGVFCILAIGLLLACLVAALEL 853

  Fly   496 MFRYVNSRQEANKWARHGIGRTPNGQSVAPSRWLRGWRRLNS------GHGQL-----------L 543
            .:......||..|     ..:..|.:.|        .||:||      .|.|:           :
Human   854 WWNSNRCHQETPK-----EDKEVNLEQV--------HRRMNSLMDEDIAHKQISPASIELSALEM 905

  Fly   544 GASTHGQNVTPPPPYQ------SIF--NGGSHGDPLNRWRRPLANGNALGNGVLLGGDSEGGVRR 600
            |.....|.:.|...||      |.|  ...|||.     .|.|::|.:....:.|...:.....:
Human   906 GGLAPTQTLEPTREYQNTQLSVSTFLPEQSSHGT-----SRTLSSGPSSNLPLPLSSSATMPSMQ 965

  Fly   601 LINGRDYMVFRNPNG----QSQLVPVRSPSAALFQ 631
            ..:       |:|||    ||   ||::|....||
Human   966 CKH-------RSPNGGLFRQS---PVKTPIPMSFQ 990

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Lig_chan-Glu_bd 83..192 CDD:463166 27/113 (24%)
Lig_chan 209..458 CDD:459656 70/276 (25%)
GRID1NP_060021.1 Interaction with CBLN1. /evidence=ECO:0000250|UniProtKB:Q61627 21..436 2/7 (29%)
PBP1_iGluR_delta_1 25..425 CDD:380615
PBP2_iGluR_delta_1 436..806 CDD:270448 103/394 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 930..954 7/28 (25%)
Blue background indicates that the domain is not in the aligned region.

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