DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and F59E12.8

DIOPT Version :9

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001364714.1 Gene:F59E12.8 / 186629 WormBaseID:WBGene00019123 Length:379 Species:Caenorhabditis elegans


Alignment Length:363 Identity:67/363 - (18%)
Similarity:139/363 - (38%) Gaps:72/363 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 VNSSTVDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQRPRESASGSGLLAPFEFWVWILILV 215
            :....:|:|.......:|:.:.:.::..|..|...:.::..|::|.....|..||...||:|:.:
 Worm     5 IQKGRIDMACGRFRMTADRANVLTFTYPTQFEVNQVYLITDPQKSVDVVFLFHPFSTTVWLLLSL 69

  Fly   216 SLLAVGPIIYALIILRNRLTGDGQQTPYSLGHCAWFVYGALMKQGSTLSPIADSTRL----LFAT 276
            ::|.|..:.:.|..:..:.|   ::|..|.......::..|:...:....:|..:..    ||:|
 Worm    70 TVLVVAIVFFILRFVEFKST---KETESSYECIQNSIFQVLLSTFNLEIRVAKKSTFFAFHLFST 131

  Fly   277 WWI--FITILTSFYTANLTAFLTLS-KFTLP----YNTVNDILTKNKHFVSMRGGGVEYAIR--T 332
            .|:  :..:...|||:.|:..:.:| |..:|    |..::.:...|....:.....:.....  |
 Worm   132 IWLLAWFHVFIDFYTSELSGMMVVSDKRQVPFDNFYGFIDHLRKGNYRLFTPSADRIPECPHEIT 196

  Fly   333 TNESLSMLNRMIQNNYAVFSD--ETNDT---------------YNLQNYVEKNGYVFVRDRPAIN 380
            |::..::.:.::..:...:.|  :.||.               |..|....|.. ::.::....:
 Worm   197 TSKCNAIFSEILSKHPPEYGDLMQLNDREFVSSRKIPLVGFGWYPAQRISSKFS-IWTQELFHSD 260

  Fly   381 IMLYRD-------YLYRKTVSFSDE------KVHCPFAMAKEPFLKKKRTFAYP----------I 422
            |.|.||       |:.|.|..:.||      ||...|:.....:     |.|||          .
 Worm   261 IWLIRDFPVCPAAYIVRPTFPYLDELNEMIIKVLPAFSRIDNHY-----TPAYPELTLTGKPSKS 320

  Fly   423 GSNLSQLFDPELLH----------LVESGIVKHLSKRN 450
            ..:|:||....|:|          |:...::..|:||:
 Worm   321 SFSLNQLSSIFLIHLLGAFVSTLFLIAELVIAELTKRH 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 63/348 (18%)
F59E12.8NP_001364714.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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