DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir76b and glr-8

DIOPT Version :9

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:NP_001368711.1 Gene:glr-8 / 180924 WormBaseID:WBGene00001619 Length:547 Species:Caenorhabditis elegans


Alignment Length:519 Identity:110/519 - (21%)
Similarity:194/519 - (37%) Gaps:100/519 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 NLIQ-MGENGTLSPVTELPMDVDASEAGFDADAPVETLETINRKKPKLREMLDWIGGKHLR--IA 88
            |::: :.|.....|.|.|..|.        .||  .||.  |.|...|.||    .|:.|:  :.
 Worm    21 NILESINEKVAHPPQTSLTSDY--------GDA--YTLS--NEKHFSLSEM----KGRTLKMVVP 69

  Fly    89 TLEDFPLSYTE-----VLENGTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDNIIGSPSDFDRSLI 148
            .:|...::|..     |.:.|  .|.||..:|:..:.|:.|.|||::....:..|          
 Worm    70 AIEPPYVNYVNFSDAAVTDKG--YGPGVVMEILKEIGKRLNLTYEILPALGSTWG---------- 122

  Fly   149 EMVNSS-----------TVDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQRPRESASGSGLL 202
            |.:|.|           .|||.|.  .::.:....|....|...:.|...:|.|..|......||
 Worm   123 EYLNGSWTGAFGQLVRGEVDLLAG--GAIMEYDRSVIADLTYPFQFEPTGIMIRSPEKYEDDTLL 185

  Fly   203 ---APFEFWVWILILVSLLAVGPIIYALIILRNRLTGDGQQTPYSLGHCAWFVYGALMKQGSTLS 264
               .||.:.||::....:|..|.|...:..:..::..:...||:   ...|..:...::||....
 Worm   186 IVTEPFSWEVWVITAAVILISGVIFLVMTNIIRKVYEEMTVTPF---ESIWVFFSIFVQQGLPEQ 247

  Fly   265 PIADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNTVNDILTKNKHFVSMRGGGVEYA 329
            |.:.|.|:|.|.||:....|::.:|.:|.|...:.|..:|:..::.::...|     :|   ::.
 Worm   248 PRSWSCRVLVALWWLASITLSATFTGSLVALFAVDKTNVPFQNIDQLVRLVK-----QG---KFE 304

  Fly   330 IRTTNESLSMLNRMIQNNYAVFSDETNDTYNLQNYVEK------NGYVFVRDRP---------AI 379
            |.....|.:....:.::...|:.|..::.  :.|:..|      .|..|||..|         .:
 Worm   305 IVMDENSFTRTEMIARSKLPVYRDLWHEM--IVNHKVKYVNGIARGVAFVRANPGYALLGPMATL 367

  Fly   380 NIMLYRDYLYRKTVSFSDEKVHCPFAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVESG--- 441
            |...|.|.   |.:.|:|..:....::   |.:|         .|..|..|..::..:||.|   
 Worm   368 NFYAYSDC---KVILFNDGILPVYLSI---PLVK---------NSIYSPYFSTKIREMVERGFTQ 417

  Fly   442 --IVKHLSKRNLPSAEICPQDLGGTERQLRNGDLMMTYYIMLAGFATALAVFSTELMFRYVNSR 503
              |..:.|...:.....|.....|.:..|........:::.|.|....||:|..|.:|::...:
 Worm   418 KWIADYRSYVAMQKINECNSTTIGPKSYLDLKRAQGAFWVFLGGAGLGLALFVGEFIFKFFREK 481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 79/389 (20%)
glr-8NP_001368711.1 PBP2_iGluR_ligand_binding 62..424 CDD:270219 83/403 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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