DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir76b and Grik5

DIOPT Version :9

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_030098003.1 Gene:Grik5 / 14809 MGIID:95818 Length:1003 Species:Mus musculus


Alignment Length:577 Identity:133/577 - (23%)
Similarity:219/577 - (37%) Gaps:112/577 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 TLETINRKKPKLREMLDWIGGKHLRI-ATLEDFPLS---------YTEVLEN------------- 103
            ||..:.:.:...||:..|...:.|.: ||..|..||         .|.:|||             
Mouse   397 TLRILEKSRQGHREIGVWYSNRTLAMNATTLDINLSQTLANKTLVVTTILENPYVMRRPNFQALS 461

  Fly   104 GTRVGHGVSFQIIDFLKKKFNFTYEVVVPQDNIIGSP---SDFDRSLIEMVNSSTVDLAAAFIPS 165
            |.....|....::..|.:...|.|.:.:.:|.:.|:|   ..:...:.|::|....|||.|....
Mouse   462 GNERFEGFCVDMLRELAELLRFRYRLRLVEDGLYGAPEPNGSWTGMVGELINRQKADLAVAAFTI 526

  Fly   166 LSDQRSFVYYSTTTLDEGEWIMVMQRPRESASGSGLLAPFEFWVWILILVSLLAVGPIIYALIIL 230
            .:::...:.:|...:..|..|:..............|.||...||:.:|::.|||..:::    |
Mouse   527 TAEREKVIDFSKPFMTLGISILYRVHMGRKPGYFSFLDPFSPAVWLFMLLAYLAVSCVLF----L 587

  Fly   231 RNRLTGDGQQTP--------------YSLGHCAWFVYGALMKQGSTLSPIADSTRLLFATWWIFI 281
            ..||:......|              |:||:..||..|..|:|||.:.|.|.|||.:...||.|.
Mouse   588 AARLSPYEWYNPHPCLRARPHILENQYTLGNSLWFPVGGFMQQGSEIMPRALSTRCVSGVWWAFT 652

  Fly   282 TILTSFYTANLTAFLTLSKFTLPYNTVNDILTKNKHFVSMRGGGVEYAIRTTNESLSMLNRMIQN 346
            .|:.|.|||||.||||:.:..:|..:.:|:..:.         .:||.......:::.       
Mouse   653 LIIISSYTANLAAFLTVQRMEVPVESADDLADQT---------NIEYGTIHAGSTMTF------- 701

  Fly   347 NYAVFSDETNDTY-NLQNYVE-KNGYVFVRD-RPAINIMLYRDY--LYRKTVSFSDEKVHCPFAM 406
                |.:....|| .:.||:: |...|||:. ...|..:|...|  |...|::....:::|....
Mouse   702 ----FQNSRYQTYQRMWNYMQSKQPSVFVKSTEEGIARVLNSRYAFLLESTMNEYHRRLNCNLTQ 762

  Fly   407 AKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVESGIVKHLSKRNLPSAEICPQDLGGTERQLRNG 471
            .......|......|:||.........:|.|.|:..::.| ||.......||::.....:.|...
Mouse   763 IGGLLDTKGYGIGMPLGSPFRDEITLAILQLQENNRLEIL-KRKWWEGGRCPKEEDHRAKGLGME 826

  Fly   472 DLMMTYYIMLAGFATALAVFSTELMFRYVNSR----------QEANKWARHGIG----------R 516
            ::...:.:::.|.  .:|||...:.|.:...|          ||..:..||.:.          |
Mouse   827 NIGGIFVVLICGL--IIAVFVAVMEFIWSTRRSAESEEVSVCQEMLQELRHAVSCRKTSRSRRRR 889

  Fly   517 TPNGQSVAPSR---WLRGWRRLNSGHGQLLGASTHGQNVTPPPPYQSIFNGGSHGDP 570
            .|.|    |||   .||..|.:...:|:|..|...|             :.|:||.|
Mouse   890 RPGG----PSRALLSLRAVREMRLSNGKLYSAGAGG-------------DAGAHGGP 929

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Periplasmic_Binding_Protein_Type_2 83..437 CDD:304360 93/398 (23%)
Grik5XP_030098003.1 PBP1_iGluR_Kainate_KA1_2 23..424 CDD:380616 6/26 (23%)
Periplasmic_Binding_Protein_Type_2 437..808 CDD:419667 92/395 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167846439
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1052
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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