DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir76b and Nmdar1

DIOPT Version :10

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_321646.4 Gene:Nmdar1 / 1281696 VectorBaseID:AGAMI1_011915 Length:966 Species:Anopheles gambiae


Alignment Length:666 Identity:148/666 - (22%)
Similarity:237/666 - (35%) Gaps:187/666 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 QMGENGTLSPVTELPMDVDAS----EAG--------------------FD--ADAPVETLETIN- 67
            :|..|.|   :||.|.|.|.|    |:|                    ||  .|......:.|| 
Mosquito   306 EMTVNET---ITEAPKDCDDSGVIWESGKRLFGYLKTRNIRGETGQVAFDDNGDRMYAEYDVINV 367

  Fly    68 -----------------RKKPKLR---EMLDWIG--GK---------HLRIATLEDFPLSYTEVL 101
                             ::|.:|:   ..:.|.|  ||         ||::.|:|:.|..|...|
Mosquito   368 HENHSFVKVGSFHYDSEKRKMRLKINDSSITWPGNTGKKPEGIMIPTHLKVLTIEEKPFVYARKL 432

  Fly   102 -------------------ENGTRVGHGVSFQIIDFLK---KKFNFTYEVVVPQDNIIGS----- 139
                               .||....:......||.||   ::.||||::.:..|...|.     
Mosquito   433 LDDEIDCADDEVVCPHFNITNGNEQEYCCKGYCIDLLKALAQRINFTYDLALSPDGQFGHYQLKN 497

  Fly   140 ---------PSDFDRSLIEMVNSSTVDLAAAFIPSLSDQRSFVYYSTTTLDEGEWIMVMQRPRES 195
                     ..:::..:.|:| :...||..|.:....::..|:.:|.....:|..|: .::|..|
Mosquito   498 HTTGIGTTVKKEWNGLIGELV-AERADLIVAPLTINPERAEFIEFSKPFKYQGITIL-EKKPSRS 560

  Fly   196 ASGSGLLAPFEFWVWILILVSLLAVGPIIYALIIL----RNRL-TGDG-QQTPYSLGHCAWFVYG 254
            ::....|.||...:|||::||:..|..::|.|...    |.:| |.|| ::...:|....||.:|
Mosquito   561 STLVSFLQPFSNTLWILVMVSVHVVALVLYLLDRFSPFGRFKLSTTDGTEEDALNLSSAIWFAWG 625

  Fly   255 ALMKQG-STLSPIADSTRLLFATWWIFITILTSFYTANLTAFLTLSKFTLPYNTVNDILTKNK-- 316
            .|:..| ...:|.:.|.|:|...|..|..|:.:.|||||.|||.|.:.......:||...:|.  
Mosquito   626 VLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTANLAAFLVLERPKTKLTGINDARLRNTME 690

  Fly   317 --HFVSMRGGGVEYAIRTTNESLSMLNRMIQNNYAVFSDETNDTYNLQNYVEKNG--YVFVRDRP 377
              ...:::|..|:...|...|..:|...|..|||........|.        |:|  ..|:.|..
Mosquito   691 NLTCATVKGSSVDMYFRRQVELSNMYRTMEANNYDTAEQAIQDV--------KDGKLMAFIWDSS 747

  Fly   378 AINIMLYRDYLYRKTVSFSDEKVHCPFAMAKEPFLKKKRTFAYPIGSNLSQLFDPELLHLVESGI 442
            .:.....:|               |....|.|.|.:.........||..:......:|...|||.
Mosquito   748 RLEYEASKD---------------CELVTAGELFGRSGYGVGLQKGSPWTDAVTLAILDFHESGF 797

  Fly   443 VKHLSK--------RNLPSAEICPQDLGGTERQLRNGDLMMTYYIML-AGFATALAVFSTELMF- 497
            ::.|.|        :.....|..|..||     |:|   |...:|:: ||....:.:...|::: 
Mosquito   798 MESLDKEWIFHGNVQQCEQFEKTPNTLG-----LKN---MAGVFILVGAGIVGGIGLIIIEVVYK 854

  Fly   498 RYVNSRQEANKWARHGIGRTPNGQSVAPSRWLRG--------------WRRLNSGHGQLLGASTH 548
            ::...:|:..:.|||           |..:| ||              .|:.|.|... :..|..
Mosquito   855 KHQIKKQKKMEIARH-----------AADKW-RGTIEKRKTLRASLAMQRQYNVGLNS-VSKSVQ 906

  Fly   549 GQN-------VTPPPP 557
            .||       :.||.|
Mosquito   907 SQNAEKSRYPILPPLP 922

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Lig_chan-Glu_bd 83..192 CDD:463166 29/153 (19%)
Lig_chan 209..458 CDD:459656 66/269 (25%)
Nmdar1XP_321646.4 None

Return to query results.
Submit another query.