DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir76b and grid2

DIOPT Version :10

Sequence 1:NP_649176.1 Gene:Ir76b / 40198 FlyBaseID:FBgn0036937 Length:636 Species:Drosophila melanogaster
Sequence 2:XP_031759030.1 Gene:grid2 / 100487676 XenbaseID:XB-GENE-955038 Length:1007 Species:Xenopus tropicalis


Alignment Length:479 Identity:120/479 - (25%)
Similarity:203/479 - (42%) Gaps:77/479 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 VACPPLNDSP---PTNLIQMGENGTLSPVTELPMDVDASEAGFDADAPVETL-----ETINRKKP 71
            :.|...|..|   ..::::..:.|.:|.:|..   :|.||.|.:.:...|.|     |.:.|...
 Frog   353 LTCIRKNSKPWQGGRSMLETVKKGGVSGLTGA---LDFSEDGGNPNIYFEILGTNYGEELGRGIR 414

  Fly    72 KL---------------REMLDWIGGKHLRIATLEDFPLSYTEVLEN---GTRVGHGVSFQIIDF 118
            ||               |::.:.:.|..||:||:.:.|  :..|.||   ..:...|.|..::|.
 Frog   415 KLGFWNPVTGLNGSLTDRKLENNMRGVVLRVATVLEEP--FVMVSENVLGKPKKYQGFSIDVLDA 477

  Fly   119 LKKKFNFTYEVVVPQDNIIGSPSDFDRS---LIEMVNSSTVDLAAAFIPSLSDQRSFVYYSTTTL 180
            |.....|.||:.|..|:..||| ..|.|   ||..:.....|:..:.:....|:.:.|.::|..:
 Frog   478 LSSYLGFKYEIYVASDHKYGSP-QADGSWNGLIGELLLKRADMGISALTITPDRENVVDFTTRYM 541

  Fly   181 DEGEWIMVMQRPRESASGSGLLAPFEFWVWILILVSLLAVGPIIYALIILRNRLTGDGQQTPYSL 245
            |....:: :::..::......||||:..:|..|..::|.||.::|.|..|.......|..|..:|
 Frog   542 DYSVGVL-LRKAEKTVDMFACLAPFDLSLWACIAGTVLLVGLLVYLLNWLNPPRLQMGSMTSTTL 605

  Fly   246 GHCAWFVYGALMKQGSTLSPIADSTRLLFATWWIFITILTSFYTANLTAFLTLSKF--------- 301
            .:..|||||:.::||..:.....:||::...||:|..|:.|.|||||.||||:|:.         
 Frog   606 YNSMWFVYGSFVQQGGEVPYTTLATRMMMGAWWLFALIVISSYTANLAAFLTISRIESSIQSLQD 670

  Fly   302 -----TLPYNTVNDILTKNKHFVSMRGGGVEYAIRTTNESLSMLNRMIQNNYAVFSDETNDTYNL 361
                 .:||.||.|    :..:..:|..|:....|  :...|.:.|||..:.   ..|.|...:|
 Frog   671 LSRQTDIPYGTVFD----SAVYEHVRVKGMNPFER--DSMYSQMWRMINRSN---GSENNVQESL 726

  Fly   362 QNY--VEKNGYVFVRDRPAINIMLYRDYLYRKTVSFSDEKVHCPFAMAKEPFLKKKRTFAYPIGS 424
            :..  |:...|.||.|...:      :|     ::.:|:  .|.|.........:....|...||
 Frog   727 EGIQKVKHGNYAFVWDAAVL------EY-----IAINDQ--DCSFYTVGNTIADRGYGIALQHGS 778

  Fly   425 NLSQLFDPELLHLVESG---IVKH 445
            ....:|...:|.|.::|   |:||
 Frog   779 PYRDIFSQRILELQQNGDMDILKH 802

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir76bNP_649176.1 Lig_chan-Glu_bd 83..192 CDD:463166 29/114 (25%)
Lig_chan 209..458 CDD:459656 69/256 (27%)
grid2XP_031759030.1 Periplasmic_Binding_Protein_type1 28..429 CDD:471960 16/78 (21%)
PBP2_iGluR_delta_2 440..806 CDD:270449 103/389 (26%)

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