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Protein Alignment Ir76b and grin2cb

DIOPT Version :9

Sequence 1:	NP_649176.1	Gene:	Ir76b / 40198	FlyBaseID:	FBgn0036937	Length:	636	Species:	Drosophila melanogaster
Sequence 2:	XP_009305071.2	Gene:	grin2cb / 100333648	ZFINID:	ZDB-GENE-100308-2	Length:	1328	Species:	Danio rerio

Alignment Length:	503	Identity:	108/503 - (21%)
Similarity:	195/503 - (38%)	Gaps:	105/503 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly    71 PKLREMLDWIG-GKHLRIATLEDFPLSYTEVLENGTR-------------------VGH------ 109
            |:....|:.:. .:||.:||||:.|....|.::..|.                   :||
Zfish   395 PRYGSFLEPVSDNRHLTVATLEERPFVIVESVDPATGTCVRNTVPCRRQSNRTESIIGHTEPYTK 459

  Fly   110 ----GVSFQIIDFLKKKFNFTYEVVVPQDNIIGSPSDFDR----SLIEMVNSSTVDLAAAFIPSL 166
                |....|:..|.:...|:|::.:..:   |......|    .:|..|.....|:|...: ::
Zfish   460 LCCKGFCIDILKKLSRTIKFSYDLYLVTN---GKHGKMVRGVWNGMIGEVFYKRADMAIGSL-TI 520

  Fly   167 SDQRS-FVYYSTTTLDEGEWIMVMQRPRESASGSGLLAPFEFWVWILILVSLLAV---------- 220
            :::|| .|.:|...::.|..:|| .|...:.|.|..|.|:...||:::.|..|.|
Zfish   521 NEERSEIVDFSVPFVETGISVMV-ARSNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAVTVFVFEY 584

  Fly   221 -GPIIYALIILRNRLTGDGQQTPYSLGHCAWFVYGALMKQGSTL-SPIADSTRLLFATWWIFITI 283
             .|:.|...::..:..|.   ..:::|...|.::|.:......: :|...:::::...|..|..|
Zfish   585 FSPVGYNRSLVSAKAPGG---PTFTIGKSVWLLWGIVFNNSVPIENPKGTTSKIMVLVWAFFAVI 646

  Fly   284 LTSFYTANLTAFLTLSKFTLPYNTVNDILTK-----NKHFVSMR-----GGGVEYAIRTTNESLS 338
            ..:.|||||.||:...::   .:||:.:..|     .:|:...|     .|..|..||:...  .
Zfish   647 FLASYTANLAAFMIQEQY---IDTVSGLSDKKFQKPQEHYPPFRFGTVPNGSTERNIRSNYP--D 706

  Fly   339 MLNRMIQNNYAVFSDETNDTYNLQNYVEKNGYV--FVRDRPAINIMLYRDYLYRKTVSFSDEKVH 401
            |...||:.|.....:..|..        |.|.:  |:.|...:|.|..:|. ..|.|:....||.
Zfish   707 MHTHMIKYNQKGVEEALNSL--------KTGKLDAFIYDAAVLNYMAGKDE-GCKLVTIGSGKVF 762

  Fly   402 CP--FAMAKEPFLKKKRTFAYPIGSNLSQLF---DPELLHLV-ESGIVKHLSKRNLPSAEICPQD 460
            ..  :.:|    |:|...:..||...|.|..   |.:.|..| .|||.:: .|..:.|:::...:
Zfish   763 ATTGYGIA----LQKDSRWKRPIDLALLQFLGDGDTQRLETVWLSGICQN-EKNEVMSSKLDIDN 822

  Fly   461 LGGTERQLRNGDLMMTYYIMLAGFATALAVFSTELMFRYVNSRQEANK 508
            :.|            .:|::|.....:|.||:.|.:. |...|...:|
Zfish   823 MAG------------VFYMLLVAMGLSLLVFAWEHLL-YWKLRHSVHK 857

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.