DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14185 and AT1G78230

DIOPT Version :10

Sequence 1:NP_649175.1 Gene:CG14185 / 40197 FlyBaseID:FBgn0036936 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_177947.3 Gene:AT1G78230 / 844159 AraportID:AT1G78230 Length:681 Species:Arabidopsis thaliana


Alignment Length:298 Identity:65/298 - (21%)
Similarity:121/298 - (40%) Gaps:58/298 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   107 DELLRRVTQRTDLEAVEQVRLRVISYTVSLSRLSLFLPRLQSLDLSGSVLSSLRDLGYGLLQLTR 171
            :.|::.:::.:.:..:..:.|:.|.   |:|..:    .|:|:|||.:.          ::|:|.
plant   421 NSLIQSLSKSSSVAHISSIGLKAIP---SISHFT----SLKSIDLSNNF----------IVQITP 468

  Fly   172 LDISNCGLNSFDGTSGLPAIRVLIADGNMIQRVDPLAELVHLRVLKARNNRISELGLLSFLGMCP 236
            ..:          ..||.|:.:   ..|.|..::.|.:|..||||....||||.:|  ..|..|.
plant   469 ASL----------PKGLHALNL---SKNKISVIEGLRDLTRLRVLDLSYNRISRIG--QGLSNCT 518

  Fly   237 QLQEVELQGNPVCRLP-LYR-------SLLARSVPTLQLLDGRVLNGEPAPVEMEEATSPASSDL 293
            .::|:.|.||.:..:. |:|       .|....:.|.:.: |:::....:.|.:....:|..:::
plant   519 LIKELYLAGNKISNVEGLHRLLKLIVLDLSFNKIATTKAI-GQLVANYNSLVALNILGNPIQNNV 582

  Fly   294 ESGSETTAQRPNTAPAPEPVPIALNAAI-----RRQVSASSGSTPVAGSVLSLVRQRRRRSGHAW 353
              |.:   |...|..:..|..:..|..:     .|:|...|.:....|...||..:|:|.|..:.
plant   583 --GED---QLRKTVSSLLPKLVYHNKQLIKPQRAREVLKDSVARAAFGGGDSLHHRRKRTSTKSV 642

  Fly   354 VSSSSSS-------GSSSASSARSTRAPSMSSCSSNSS 384
            |.|:|.|       .....|..||.|....:|.:...|
plant   643 VGSASPSVHHRGHIAKGRGSKNRSQRQLRKTSAAGTPS 680

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14185NP_649175.1 leucine-rich repeat 146..168 CDD:275380 5/21 (24%)
PPP1R42 <169..271 CDD:455733 27/109 (25%)
leucine-rich repeat 169..190 CDD:275380 3/20 (15%)
leucine-rich repeat 191..212 CDD:275380 4/20 (20%)
leucine-rich repeat 213..237 CDD:275380 11/23 (48%)
AT1G78230NP_177947.3 LRR <435..>580 CDD:443914 40/177 (23%)
leucine-rich repeat 453..474 CDD:275378 7/40 (18%)
leucine-rich repeat 475..496 CDD:275378 6/23 (26%)
leucine-rich repeat 497..519 CDD:275378 11/23 (48%)
leucine-rich repeat 520..541 CDD:275378 6/20 (30%)
leucine-rich repeat 542..554 CDD:275378 1/11 (9%)

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