DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14185 and U2A'

DIOPT Version :10

Sequence 1:NP_649175.1 Gene:CG14185 / 40197 FlyBaseID:FBgn0036936 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_172447.1 Gene:U2A' / 837505 AraportID:AT1G09760 Length:249 Species:Arabidopsis thaliana


Alignment Length:222 Identity:59/222 - (26%)
Similarity:98/222 - (44%) Gaps:36/222 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   147 QSLDLSGSVLSSLRDLGYGLLQLTRLDISNCGLNSFDGTSGLPAIRVLIADGNMIQRVDP-LAE- 209
            :.|||.|:.:..:.:||....|...:|:|:..:...:....|..:..|:.:.|.|.|::| |.| 
plant    22 RELDLRGNKIPVIENLGATEDQFDTIDLSDNEIVKLENFPYLNRLGTLLINNNRITRINPNLGEF 86

  Fly   210 LVHLRVLKARNNRISELGLLSFLGMCPQLQEVELQGNPVCRLPLYRSLLARSVPTLQLLDGRVLN 274
            |..|..|...|||:..|..:..|...|:||.:.|..|.:.:...||..:...:.:|::||...:.
plant    87 LPKLHSLVLTNNRLVNLVEIDPLASIPKLQYLSLLDNNITKKANYRLYVIHKLKSLRVLDFIKIK 151

  Fly   275 GEPAPVEMEEATSPASS-------------DLESGSETTAQRPNT----APAPEPVPIALNAAI- 321
            .:    |..||.|..||             :::..|| ||:.|.|    ||..|.: :|:.||| 
plant   152 AK----ERAEAASLFSSKEAEEEVKKVSREEVKKVSE-TAENPETPKVVAPTAEQI-LAIKAAII 210

  Fly   322 ---------RRQVSASSGSTPVAGSVL 339
                     |.:.:...|..| ||.::
plant   211 NSQTIEEIARLEQALKFGQVP-AGLII 236

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14185NP_649175.1 leucine-rich repeat 146..168 CDD:275380 6/20 (30%)
PPP1R42 <169..271 CDD:455733 28/103 (27%)
leucine-rich repeat 169..190 CDD:275380 3/20 (15%)
leucine-rich repeat 191..212 CDD:275380 8/22 (36%)
leucine-rich repeat 213..237 CDD:275380 7/23 (30%)
U2A'NP_172447.1 LRR_9 1..175 CDD:405295 41/156 (26%)
leucine-rich repeat 22..39 CDD:275378 5/16 (31%)
leucine-rich repeat 40..65 CDD:275378 4/24 (17%)
leucine-rich repeat 66..89 CDD:275378 8/22 (36%)
leucine-rich repeat 90..114 CDD:275378 7/23 (30%)
leucine-rich repeat 115..126 CDD:275378 4/10 (40%)

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