DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14185 and Lrrcc1

DIOPT Version :9

Sequence 1:NP_649175.1 Gene:CG14185 / 40197 FlyBaseID:FBgn0036936 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_001157051.1 Gene:Lrrcc1 / 71710 MGIID:1918960 Length:1026 Species:Mus musculus


Alignment Length:251 Identity:64/251 - (25%)
Similarity:114/251 - (45%) Gaps:55/251 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 SLSRLSLFLPRLQSLDLSGSVLSSLRDLGYGLLQLTRLDISNCGLNSFDGTSGLPAIRVLIADGN 199
            |:|.|||. ..:.:::|..:.:|.:..:.: :..|..||:|:..::..:|.:.|..:..|....|
Mouse    30 SISELSLD-SSIHAINLHCNNISKISSIDH-IWNLRHLDLSSNQISQIEGLNTLTKLCTLNLSCN 92

  Fly   200 MIQRVDPLAELVHLRVLKARNNRISEL-GLLSFLGMCPQLQEVEL-------------------- 243
            :|.||:.|..||:|..|....|.|::| ||:...|:..:|:.::|                    
Mouse    93 LITRVEGLEALVNLTKLNLSYNHINDLSGLMPLHGLKYKLRYIDLHSNYIDSIHHLLQCTVGLHF 157

  Fly   244 ----------QGNPVCRLPLYRSLLARSVPTLQLLDGRVLNGEPAPVEMEEATSPASSDLESGSE 298
                      :|||:|.:|.||:::.:::|.|::||.:.:.||  ||.:||..|.....||...:
Mouse   158 LTNLILEKDGEGNPICLIPGYRAIILQTLPQLRILDCKNIFGE--PVSLEEINSSHLQCLEGLLD 220

  Fly   299 TTAQRPNTAPAPEPVPIALNAAIRRQVSA----------SSGSTP---VAGSVLSL 341
                  |...:..|:.|: ...:...|||          ...|||   |..|:||:
Mouse   221 ------NLVSSDSPLNIS-EDEVNDDVSAPPMDVLPSLKEFKSTPEDNVLASLLSV 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14185NP_649175.1 LRR_8 144..201 CDD:290566 10/56 (18%)
leucine-rich repeat 146..168 CDD:275380 2/21 (10%)
LRR_4 168..209 CDD:289563 12/40 (30%)
leucine-rich repeat 169..190 CDD:275380 6/20 (30%)
leucine-rich repeat 191..212 CDD:275380 7/20 (35%)
leucine-rich repeat 213..237 CDD:275380 8/24 (33%)
Lrrcc1NP_001157051.1 LRR <30..115 CDD:227223 23/86 (27%)
LRR 1 39..60 2/21 (10%)
leucine-rich repeat 43..61 CDD:275378 2/18 (11%)
LRR_4 61..101 CDD:289563 11/39 (28%)
LRR 2 61..82 5/20 (25%)
leucine-rich repeat 62..83 CDD:275378 6/20 (30%)
LRR_8 82..142 CDD:290566 18/59 (31%)
LRR_4 82..122 CDD:289563 13/39 (33%)
LRR 3 83..104 6/20 (30%)
leucine-rich repeat 84..105 CDD:275378 7/20 (35%)
LRR_4 105..148 CDD:289563 10/42 (24%)
LRR 4 105..126 7/20 (35%)
leucine-rich repeat 106..131 CDD:275378 8/24 (33%)
LRR 5 131..152 2/20 (10%)
leucine-rich repeat 132..145 CDD:275378 2/12 (17%)
leucine-rich repeat 158..188 CDD:275380 7/29 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 310..338
SbcC <421..952 CDD:223496
FAM184 793..1026 CDD:292293
DUF342 <817..894 CDD:302792
RRF <915..969 CDD:294170
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0531
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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