DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14185 and Lrrcc1

DIOPT Version :10

Sequence 1:NP_649175.1 Gene:CG14185 / 40197 FlyBaseID:FBgn0036936 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_001157051.1 Gene:Lrrcc1 / 71710 MGIID:1918960 Length:1026 Species:Mus musculus


Alignment Length:251 Identity:64/251 - (25%)
Similarity:114/251 - (45%) Gaps:55/251 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 SLSRLSLFLPRLQSLDLSGSVLSSLRDLGYGLLQLTRLDISNCGLNSFDGTSGLPAIRVLIADGN 199
            |:|.|||. ..:.:::|..:.:|.:..:.: :..|..||:|:..::..:|.:.|..:..|....|
Mouse    30 SISELSLD-SSIHAINLHCNNISKISSIDH-IWNLRHLDLSSNQISQIEGLNTLTKLCTLNLSCN 92

  Fly   200 MIQRVDPLAELVHLRVLKARNNRISEL-GLLSFLGMCPQLQEVEL-------------------- 243
            :|.||:.|..||:|..|....|.|::| ||:...|:..:|:.::|                    
Mouse    93 LITRVEGLEALVNLTKLNLSYNHINDLSGLMPLHGLKYKLRYIDLHSNYIDSIHHLLQCTVGLHF 157

  Fly   244 ----------QGNPVCRLPLYRSLLARSVPTLQLLDGRVLNGEPAPVEMEEATSPASSDLESGSE 298
                      :|||:|.:|.||:::.:::|.|::||.:.:.||  ||.:||..|.....||...:
Mouse   158 LTNLILEKDGEGNPICLIPGYRAIILQTLPQLRILDCKNIFGE--PVSLEEINSSHLQCLEGLLD 220

  Fly   299 TTAQRPNTAPAPEPVPIALNAAIRRQVSA----------SSGSTP---VAGSVLSL 341
                  |...:..|:.|: ...:...|||          ...|||   |..|:||:
Mouse   221 ------NLVSSDSPLNIS-EDEVNDDVSAPPMDVLPSLKEFKSTPEDNVLASLLSV 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14185NP_649175.1 leucine-rich repeat 146..168 CDD:275380 2/21 (10%)
PPP1R42 <169..271 CDD:455733 35/132 (27%)
leucine-rich repeat 169..190 CDD:275380 6/20 (30%)
leucine-rich repeat 191..212 CDD:275380 7/20 (35%)
leucine-rich repeat 213..237 CDD:275380 8/24 (33%)
Lrrcc1NP_001157051.1 PPP1R42 25..197 CDD:455733 42/168 (25%)
LRR 1 39..60 2/21 (10%)
leucine-rich repeat 43..61 CDD:275378 2/18 (11%)
LRR 2 61..82 5/20 (25%)
leucine-rich repeat 62..83 CDD:275378 6/20 (30%)
LRR 3 83..104 6/20 (30%)
leucine-rich repeat 84..105 CDD:275378 7/20 (35%)
LRR 4 105..126 7/20 (35%)
leucine-rich repeat 106..131 CDD:275378 8/24 (33%)
LRR 5 131..152 2/20 (10%)
leucine-rich repeat 132..145 CDD:275378 2/12 (17%)
leucine-rich repeat 158..188 CDD:275380 7/29 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 310..338
SMC_N 467..>766 CDD:481474
SMC_prok_B <646..1026 CDD:274008
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.