DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14185 and Lrrc56

DIOPT Version :10

Sequence 1:NP_649175.1 Gene:CG14185 / 40197 FlyBaseID:FBgn0036936 Length:402 Species:Drosophila melanogaster
Sequence 2:XP_006536303.1 Gene:Lrrc56 / 70552 MGIID:1917802 Length:559 Species:Mus musculus


Alignment Length:323 Identity:90/323 - (27%)
Similarity:130/323 - (40%) Gaps:68/323 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 PGPAALAQVRMPPPEVRLNQQ---NPAQQQQQRMQFNRRQLGRRNSFDRDVAIAEEEQHLPAFVH 91
            ||.|:: :||      .|:.|   ||..|       |:| ||......|:..:  ||:..||   
Mouse    20 PGTASI-RVR------ELSWQGLNNPHPQ-------NKR-LGSHGDIHRERWV--EERLSPA--- 64

  Fly    92 LLPVVLPQQGPEPTLDELLRRVTQRTDLEAVEQVRLRVISYTVSLSRLSLFLPRLQSLDLSGSVL 156
                             .|:.:.|..||:.|..:.:.|.:...||....|:||.|..|.|:.|.|
Mouse    65 -----------------RLQALAQVDDLQLVRVLEMCVDTRKNSLGNFGLYLPNLIQLKLNHSYL 112

  Fly   157 SSLRDLGYGLLQLTRLDISNCGLNSFDGTSGLPAIRVLIADGNMIQRVDPLAELVHLRVLKARNN 221
            .||||||..|..|..|.::.|||...||......::.|....|.|..:.||..|..|.||....|
Mouse   113 GSLRDLGTSLGHLQVLWLARCGLTDLDGIGSFLELKELYVSYNNISDLSPLCLLEQLEVLDLEGN 177

  Fly   222 RISELGLLSFLGMCPQLQEVELQGNPVCRLP------------LYRSLLARSVPTLQLLD--GRV 272
            .:.:||.:.:|.:||:|..:.|:||.||..|            .||:.:.:.:|.|.:||  ...
Mouse   178 NVEDLGQMRYLQLCPRLAMLTLEGNLVCLKPDPGPSNKAPQGYNYRAEVKKLIPQLHVLDEVPTT 242

  Fly   273 LNGEPAPVEMEEATSPASSDLESGSETTAQRPN--------------TAPAPEPVPIALNAAI 321
            ....|||..:.:........::.||......|.              |.|.||..|.||:..:
Mouse   243 CTSAPAPQTLSQDWLMVKEAIKEGSVLDILLPRLDDPHGATIRKFDPTLPVPETQPWALSLLV 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14185NP_649175.1 leucine-rich repeat 146..168 CDD:275380 12/21 (57%)
PPP1R42 <169..271 CDD:455733 35/115 (30%)
leucine-rich repeat 169..190 CDD:275380 7/20 (35%)
leucine-rich repeat 191..212 CDD:275380 6/20 (30%)
leucine-rich repeat 213..237 CDD:275380 8/23 (35%)
Lrrc56XP_006536303.1 LRR <90..>203 CDD:443914 42/112 (38%)
leucine-rich repeat 102..124 CDD:275380 12/21 (57%)
leucine-rich repeat 125..146 CDD:275380 7/20 (35%)
leucine-rich repeat 147..168 CDD:275380 6/20 (30%)
leucine-rich repeat 169..193 CDD:275380 8/23 (35%)

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