DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14185 and Lrriq3

DIOPT Version :9

Sequence 1:NP_649175.1 Gene:CG14185 / 40197 FlyBaseID:FBgn0036936 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_001019478.1 Gene:Lrriq3 / 499732 RGDID:1591943 Length:633 Species:Rattus norvegicus


Alignment Length:152 Identity:30/152 - (19%)
Similarity:51/152 - (33%) Gaps:49/152 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 LNSFDGTSGLPAIRVLIADGNMIQRVDPLA-------------------------ELVHLRVLKA 218
            |.|.:......::||.|...|.:..:.||.                         .|.:|::|..
  Rat    40 LKSMENLQSCISLRVCIFSNNFVTDIQPLQGCKKLIKLDLHGNQIKTLPDRTFWNGLKNLKLLYL 104

  Fly   219 RNNRISELGLLSFLGMCPQLQEVELQGNPVCRLPLYRSLLARSVPTLQLLDGRVLNGE------- 276
            .:|..::|..:..|..|..|..:.:...||.....||.:|..|:..|:.||..|::.|       
  Rat   105 HDNGFAKLKNICVLSGCVNLVGLTMFDCPVSLKKGYRHVLVNSIWPLKALDHHVISDEEIIQNWH 169

  Fly   277 -----------------PAPVE 281
                             |||::
  Rat   170 LPERFKTFSQSLFFNICPAPIK 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14185NP_649175.1 LRR_8 144..201 CDD:290566 6/21 (29%)
leucine-rich repeat 146..168 CDD:275380
LRR_4 168..209 CDD:289563 8/54 (15%)
leucine-rich repeat 169..190 CDD:275380 2/10 (20%)
leucine-rich repeat 191..212 CDD:275380 7/45 (16%)
leucine-rich repeat 213..237 CDD:275380 6/23 (26%)
Lrriq3NP_001019478.1 PPP1R42 36..>128 CDD:411060 16/87 (18%)
LRR 1 51..72 6/20 (30%)
leucine-rich repeat 52..73 CDD:275378 6/20 (30%)
LRR 2 73..94 0/20 (0%)
leucine-rich repeat 74..98 CDD:275378 1/23 (4%)
LRR 3 98..119 4/20 (20%)
leucine-rich repeat 99..115 CDD:275378 4/15 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..343
DUF5401 <388..>586 CDD:375164
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0531
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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