DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14185 and CG13708

DIOPT Version :9

Sequence 1:NP_649175.1 Gene:CG14185 / 40197 FlyBaseID:FBgn0036936 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_001261433.1 Gene:CG13708 / 38582 FlyBaseID:FBgn0035577 Length:1301 Species:Drosophila melanogaster


Alignment Length:344 Identity:80/344 - (23%)
Similarity:123/344 - (35%) Gaps:110/344 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 PTLDELLRRVTQRTDLEAVEQVR--LRVI----SYTVSL-SRLSLFLPRLQSLDLSGSVLSSLRD 161
            |:|..||....:.||:..:..::  |||:    :...|| ||::. |.:|:||:|:|:.:..:..
  Fly   492 PSLSVLLLGKNRITDIGGLSSLKDTLRVLDLHGNKLTSLGSRINC-LQQLKSLNLAGNQIRQINQ 555

  Fly   162 LGY-GLLQLTRLDISNCGLNSFDGTSGLPAIRVLIADGNMIQRVDPLAELVHLRVLKARNNRISE 225
            ..: ||..|..|::....|...:|...|.|:..|....|.:.|||.:|.:       ||..|   
  Fly   556 QDFLGLRCLRELNLKRNKLRRINGFQHLVALERLWLCHNDLHRVDDMASI-------ARATR--- 610

  Fly   226 LGLLSFLGMCPQLQEVELQGNPVCRLPLYRSLLARSVPTLQLLDGRVL----------------N 274
                        |.||.::.|||.......|.|...:|.||.|....:                .
  Fly   611 ------------LLEVTIENNPVSLAGDCVSFLVSYLPLLQTLSQMPITEQVRRAALAWRQHKEQ 663

  Fly   275 GEPAP--------VEMEEATSPASSDLE--SGSETTAQRP--------------NTAPA------ 309
            .:.||        :..||..|.|.::.|  ...:|...||              |..||      
  Fly   664 AQAAPGSSEAYHNIRREEVISNARTNWELLRSQQTVVGRPKSRLTSELAKINESNEGPAGEEGEM 728

  Fly   310 -------PEPVPIALNAAIRRQVSASSGSTPVAGSVLSLVRQRRRRSGHAWVSSSSSSGSSSASS 367
                   |:.:...|.|.|:        ..|:|..:         |:.|.         ...|||
  Fly   729 ESEESQQPKELMDELQALIK--------LPPIAKDL---------RNPHE---------EDGASS 767

  Fly   368 ARSTRAPSMSSCSSNSSLD 386
            ..|:..|::.||||..|.|
  Fly   768 EASSLGPNVDSCSSCYSSD 786

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG14185NP_649175.1 LRR_8 144..201 CDD:290566 15/57 (26%)
leucine-rich repeat 146..168 CDD:275380 7/22 (32%)
LRR_4 168..209 CDD:289563 11/40 (28%)
leucine-rich repeat 169..190 CDD:275380 5/20 (25%)
leucine-rich repeat 191..212 CDD:275380 6/20 (30%)
leucine-rich repeat 213..237 CDD:275380 3/23 (13%)
CG13708NP_001261433.1 LRR_RI <428..572 CDD:238064 23/80 (29%)
leucine-rich repeat 449..471 CDD:275380