DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14185 and Lrrc46

DIOPT Version :10

Sequence 1:NP_649175.1 Gene:CG14185 / 40197 FlyBaseID:FBgn0036936 Length:402 Species:Drosophila melanogaster
Sequence 2:NP_001004201.1 Gene:Lrrc46 / 287653 RGDID:1303311 Length:323 Species:Rattus norvegicus


Alignment Length:331 Identity:73/331 - (22%)
Similarity:119/331 - (35%) Gaps:81/331 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 RRVTQRTDLEAVEQVRLRVISYTVSLSRLSLFLPRLQSLDLSGSVLSSLRDLGYGLLQLTRLDIS 175
            :..||:|:    |.|.:.    ...:::.:|..|  :..|||..:..:|.|     |:..|||  
  Rat     9 KNATQKTE----EGVHIT----EALITKRNLTFP--EDEDLSEKMFHTLDD-----LETVRLD-- 56

  Fly   176 NCGLNSFDGTSGLPAIRVLIADGNMIQRVDPLAELVHLRVLKARNNRIS------ELGLLSFLGM 234
            ..|:........|..|..|....|.|||::.||.:..||.|....|:|.      :|..|.||.:
  Rat    57 GEGITCIGNLERLRNIHSLYLQSNKIQRIENLACITSLRFLSLAGNQIRHVENLLDLQYLQFLDL 121

  Fly   235 CPQLQE-------------VELQGNPVCRLPLYRSLLARSVPTLQLLDGRVL----------NGE 276
            ...|.|             :.|.|||......||.::..::|.|..||.:.:          ...
  Rat   122 SENLIETLKLDELPQSLLILNLCGNPCTNQDGYRKMVIGALPLLLDLDKQPILERWTSDEEDKSS 186

  Fly   277 PAPVEMEEATSPASS------DLESGSETTAQRPNTA------------------PAPEPVPIA- 316
            ....|..|...|..:      |||.......:|...|                  |....||:| 
  Rat   187 DEEEEFPELNGPFCAERGFFKDLEQELHQHQERRQQAALTEHLSRMETQPVLTDLPLLPAVPMAG 251

  Fly   317 -LNAAI-----RRQVSASSGSTPVAGSVLSLVRQRRRRSGHAWVSSSSSSGSSSASSARSTRAPS 375
             .:.|:     :.....::.||.:|.|....|.:.::.|    |.:...:.:::||......|||
  Rat   252 DCSPAVTEEPGKEAAPKATSSTQMASSSKKQVPRNQKGS----VQARKGALAATASKTSLAAAPS 312

  Fly   376 MSSCSS 381
            |:..::
  Rat   313 MTKSTN 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14185NP_649175.1 leucine-rich repeat 146..168 CDD:275380 5/21 (24%)
PPP1R42 <169..271 CDD:455733 34/120 (28%)
leucine-rich repeat 169..190 CDD:275380 5/20 (25%)
leucine-rich repeat 191..212 CDD:275380 8/20 (40%)
leucine-rich repeat 213..237 CDD:275380 9/29 (31%)
Lrrc46NP_001004201.1 LRR 1 49..70 6/27 (22%)
leucine-rich repeat 50..71 CDD:275378 6/22 (27%)
PPP1R42 60..177 CDD:455733 30/116 (26%)
LRR 2 71..92 8/20 (40%)
leucine-rich repeat 72..93 CDD:275378 8/20 (40%)
LRR 3 93..114 5/20 (25%)
leucine-rich repeat 94..115 CDD:275378 6/20 (30%)
LRR 4 115..135 5/19 (26%)
leucine-rich repeat 116..137 CDD:275378 5/20 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 252..323 14/71 (20%)

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