DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14185 and LRRC43

DIOPT Version :10

Sequence 1:NP_649175.1 Gene:CG14185 / 40197 FlyBaseID:FBgn0036936 Length:402 Species:Drosophila melanogaster
Sequence 2:XP_047284614.1 Gene:LRRC43 / 254050 HGNCID:28562 Length:688 Species:Homo sapiens


Alignment Length:320 Identity:74/320 - (23%)
Similarity:113/320 - (35%) Gaps:105/320 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 DRDVAIAEEEQHLPAFVHLLPVVLPQQGPEPTL------DELLRRVTQRTDLEAVEQV------R 126
            :.|| ::..|:.:.|   ||.:|..:..|...|      |..||.:..|..|...:..      .
Human    70 EEDV-VSPGEETVEA---LLGLVRSRHSPWALLNNSNAEDSFLRELAIRNPLTITDTFFYSYFRS 130

  Fly   127 LRVISYTVSLSRLSLFLPRLQSLDLSGSVLSSLRDLGYGLLQLTRLDISNCGLNSFDGTSGLPAI 191
            ||||...|:|....|    |:.|.|...|||:.|                  :...|.|:..|.:
Human   131 LRVIDKKVTLVDKDL----LKFLKLEELVLSANR------------------IKEVDATNLPPTL 173

  Fly   192 RVLIADGNMIQRVD-----PLAELVHL-----RVL------------------------------ 216
            :||...||.|..::     |.|.|.||     ::|                              
Human   174 KVLELYGNEISSMECLCAHPPAGLQHLGLGHNKLLGPLESLYVTANHWLLAPCSPGFLTPRRSCS 238

  Fly   217 KARNNRIS-ELG---------LLSFLGMCPQLQEVELQGNPVCRLPLYRSLLARSVPTLQLLD-- 269
            .:|.|.:| :||         :::.|.....|:.:.|||||:..:|.||.|...|:..|.:||  
Human   239 PSRPNLVSLDLGFNDLTDLQSMVTSLRTLRHLRLLVLQGNPLALVPYYRGLTIDSLAQLCVLDDI 303

  Fly   270 -----------GRVLNGEPAPVEMEEATSPASSDLESGSETTAQRPNTAPAPEPVPIALN 318
                       |..|||:....|.:...:  ..::....:|:...|.  |.||...|..|
Human   304 TVSPNEKHLFRGLSLNGDLLAQEAQFVVT--IGNIRGVLDTSVLDPE--PRPEGPFITYN 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14185NP_649175.1 leucine-rich repeat 146..168 CDD:275380 7/21 (33%)
PPP1R42 <169..271 CDD:455733 34/164 (21%)
leucine-rich repeat 169..190 CDD:275380 2/20 (10%)
leucine-rich repeat 191..212 CDD:275380 8/25 (32%)
leucine-rich repeat 213..237 CDD:275380 8/68 (12%)
LRRC43XP_047284614.1 PPP1R42 156..310 CDD:455733 37/171 (22%)
leucine-rich repeat 173..196 CDD:275378 6/22 (27%)
leucine-rich repeat 197..243 CDD:275378 5/45 (11%)

Return to query results.
Submit another query.