Protein Alignment CG14185 and snrpa1

DIOPT Version :10

• Sequence 1: NP_649175.1
• Gene: CG14185 / 40197
• FlyBaseID: FBgn0036936
• Length: 402
• Species: Drosophila melanogaster
• Sequence 2: XP_002939312.2
• Gene: snrpa1 / 100486145
• XenbaseID: XB-GENE-1007226
• Length: 255
• Species: Xenopus tropicalis
• Alignment Length: 240
• Identity: 61/240 - (25%)
• Similarity: 93/240 - (38%)
• Gaps: 30/240 - (12%)

  Fly   145 RLQSLDLSGSVLSSLRDLGYGLLQLTRLDISNCGLNSFDGTSGLPAIRVLIADGNMIQRVDPLAE 209
            |.:.|||.|..:..:.:||..|.|...:|.|:..:...||...|..::.|:.:.|.|.|:....|
 Frog    20 RDRELDLRGYKIPVIENLGATLDQFDTIDCSDNEIRKLDGFPLLKRLKTLLLNNNRICRIGEGIE 84

  Fly   210 --LVHLRVLKARNNRISELGLLSFLGMCPQLQEVELQGNPVCRLPLYRSLLARSVPTLQLLDGRV 272
              |.:|..|...||.|:|||.|..|..|..|..:.|..|||.....||..:...:|.:::||...
 Frog    85 HALPNLTELILTNNSITELGDLDNLSPCKHLTYISLLRNPVTNKRHYRMYVIYKIPQVRVLDFEK 149

  Fly   273 LNGEPAPVEMEEAT--------SPASSDLESGSET-------TAQRPNTAPAPEPVPIALNAAIR 322
            :...    |.|||.        :..:.|:...|:|       ..::....|:|..|....||...
 Frog   150 VKQS----EREEAANMFKGKRGAQLAKDIAKRSKTFVPGAGLPTEKKKAGPSPGDVEAIKNAIAN 210

  Fly   323 RQVSA---------SSGSTPVAGSVLSLVRQRRRRSGHAWVSSSS 358
            ....|         .||..|....||:...:.........|::.|
 Frog   211 ATTLAEVERLNGLLQSGQIPGKDHVLATSEEAEEEMDEDVVTNGS 255

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG14185	NP_649175.1	leucine-rich repeat	146..168	CDD:275380	7/21 (33%)
		PPP1R42	<169..271	CDD:455733	32/103 (31%)
		leucine-rich repeat	169..190	CDD:275380	5/20 (25%)
		leucine-rich repeat	191..212	CDD:275380	6/22 (27%)
		leucine-rich repeat	213..237	CDD:275380	11/23 (48%)
snrpa1	XP_002939312.2	LRR_9	1..175	CDD:405295	46/158 (29%)
		leucine-rich repeat	46..65	CDD:275380	5/18 (28%)
		leucine-rich repeat	90..114	CDD:275380	11/23 (48%)