DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and gpr83

DIOPT Version :9

Sequence 1:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001072505.1 Gene:gpr83 / 779960 XenbaseID:XB-GENE-5817068 Length:420 Species:Xenopus tropicalis


Alignment Length:396 Identity:125/396 - (31%)
Similarity:194/396 - (48%) Gaps:71/396 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 VQIFFYVLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFM 126
            |:....|.|:.:.|:.:|||:|||:||::|..||:.|::||.|||::||::.:|..|||.:....
 Frog    68 VKALLIVAYSVIIVISLFGNILVCHVVIKNSRMQSATSLFIVNLAVADIMITLLNTPFTLVRFVS 132

  Fly   127 GRWAFGRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIGI--IVSIWVIA 189
            ..|.||:.:||:..|.|.||:::|.|||.:||:||:.||::|..|||  ||..||  |:.||.:|
 Frog   133 STWVFGKLMCHVSRFVQYCSVHVSVLTLMAIALDRHQVIMHPLKPRM--STVKGIICIIVIWFMA 195

  Fly   190 LLATVPYGMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTA 254
            ...::|:.:|.|:....:..|       |....:                               
 Frog   196 SGFSLPHAVYQKLEQFFIGNT-------VRMVCL------------------------------- 222

  Fly   255 GSTGPEMPYVRVYCEENWPSEQYRKVFGAITTTLQFVLPFFIISICYVWISVKLNQRARAKPGSK 319
                |..||         |::.:.|.....|..|.:|||..:|||.|..::.||  ..|...|..
 Frog   223 ----PSFPY---------PADLFWKYLDLATFVLLYVLPLIVISITYTTVAKKL--WLRNAIGDI 272

  Fly   320 SSRREEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDDKSNEWRFYILFFFVAHSIAMS 384
            :..:..|.|.:||.|.:||:.:|.||.:.|.|:|...:.......|:....|..|    |..|||
 Frog   273 TMEQYYAHRRKKKMTLKMLMLVVVVFAVCWFPLNCYLVLMSSKVISSNNAIYFAF----HWFAMS 333

  Fly   385 STCYNPFLYAWLNENFRKEFKHVLPCF----NPSNNN-IINITRGYNRSDRNTCGPRLHHGKGDG 444
            |||||||:|.||||:||.|.|.:| |.    :|:.:: :.:::..:..:....|    |..:|..
 Frog   334 STCYNPFIYCWLNESFRSELKALL-CVCRRRSPAQSHPLQSVSPQFRHAWTENC----HFKQGSS 393

  Fly   445 GMGGGS 450
            ....||
 Frog   394 SQAAGS 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 55/122 (45%)
7tm_1 80..393 CDD:278431 103/314 (33%)
gpr83NP_001072505.1 7tmA_GPR83 70..353 CDD:320511 114/341 (33%)
TM helix 1 71..97 CDD:320511 11/25 (44%)
TM helix 2 104..129 CDD:320511 12/24 (50%)
TM helix 3 142..172 CDD:320511 15/29 (52%)
TM helix 4 183..204 CDD:320511 7/20 (35%)
TM helix 5 233..262 CDD:320511 10/28 (36%)
TM helix 6 282..312 CDD:320511 11/29 (38%)
TM helix 7 321..346 CDD:320511 15/28 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1072979at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X589
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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