DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and Npy2r

DIOPT Version :10

Sequence 1:NP_524176.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_076458.1 Gene:Npy2r / 66024 RGDID:620475 Length:381 Species:Rattus norvegicus


Alignment Length:354 Identity:122/354 - (34%)
Similarity:175/354 - (49%) Gaps:65/354 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 VQIFFYVLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFM 126
            ||:...:.|.::.:|||.||.||.:||::.::|:||||.||.|||::|:|:..|.:|||..||.|
  Rat    49 VQVVLILAYCSIILLGVVGNSLVIHVVIKFKSMRTVTNFFIANLAVADLLVNTLCLPFTLTYTLM 113

  Fly   127 GRWAFGRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIG--IIVSIWVIA 189
            |.|..|..|||||.:|||.::.:||:|||.||:||:..|:|  |...|:|..|.  ||...|.::
  Rat   114 GEWKMGPVLCHLVPYAQGLAVQVSTITLTVIALDRHRCIVY--HLESKISKQISFLIIGLAWGVS 176

  Fly   190 LLATVPYGMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTA 254
            .|...|..::.:.             :|:|.                 .||              
  Rat   177 ALLASPLAIFREY-------------SLIEI-----------------IPD-------------- 197

  Fly   255 GSTGPEMPYVRVYCEENWPSEQ---YRKVFGAITTTLQFVLPFFIISICYVWISVKLNQRARAKP 316
                    :..|.|.|.||.|:   |..|:...|..:.:|||..|||..|..|..||  :....|
  Rat   198 --------FEIVACTEKWPGEEKSVYGTVYSLSTLLILYVLPLGIISFSYTRIWSKL--KNHVSP 252

  Fly   317 GSKSSRREEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDDKSNEWRFYILFFFVAHSI 381
            |:.|....:    |:.:|.:||:.:|.||.:||||::...:..|.|....:.:.|.|.|.|.|.|
  Rat   253 GAASDHYHQ----RRHKTTKMLVCVVVVFAVSWLPLHAFQLAVDIDSHVLDLKEYKLIFTVFHII 313

  Fly   382 AMSSTCYNPFLYAWLNENFRKEFKHVLPC 410
            ||.||..||.||.|:|.|:||.|.....|
  Rat   314 AMCSTFANPLLYGWMNSNYRKAFLSAFRC 342

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_524176.1 7tmA_NPYR-like 64..404 CDD:320331 118/344 (34%)
TM helix 1 65..91 CDD:320331 10/25 (40%)
TM helix 2 98..123 CDD:320331 13/24 (54%)
TM helix 3 136..166 CDD:320331 16/29 (55%)
TM helix 4 177..198 CDD:320331 6/22 (27%)
TM helix 5 278..307 CDD:320331 10/28 (36%)
TM helix 6 329..359 CDD:320331 11/29 (38%)
TM helix 7 372..397 CDD:320331 14/24 (58%)
Npy2rNP_076458.1 7tmA_NPY2R 51..336 CDD:320521 118/344 (34%)
TM helix 1 52..78 CDD:320521 10/25 (40%)
TM helix 2 85..110 CDD:320521 13/24 (54%)
TM helix 3 123..153 CDD:320521 16/29 (55%)
TM helix 4 164..185 CDD:320521 6/20 (30%)
TM helix 5 216..245 CDD:320521 10/28 (36%)
TM helix 6 261..291 CDD:320521 11/33 (33%)
TM helix 7 304..329 CDD:320521 14/24 (58%)

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