DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and hcrtr2

DIOPT Version :9

Sequence 1:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001073337.1 Gene:hcrtr2 / 561260 ZFINID:ZDB-GENE-070228-3 Length:424 Species:Danio rerio


Alignment Length:418 Identity:104/418 - (24%)
Similarity:178/418 - (42%) Gaps:107/418 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 QFVQIFFYVLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYT 124
            ::|.|..|:|   ||::.:.||.|||:.|.:|..|:||||.||.||:.:|||:.:..:|.:.:..
Zfish    54 EWVLIAGYIL---VFLVSLVGNTLVCFAVWKNHHMRTVTNYFIVNLSFADILVTITCLPASLVVD 115

  Fly   125 FMGRWAFGRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIGIIVSIWVIA 189
            ....|.||::||.::.:.|..|:.:|.|||:.||.||::.|.:|...:.........||.||:::
Zfish   116 ITETWFFGQTLCKILPYLQTISVSVSVLTLSCIAQDRWYAICHPLKFKSTAKRARKSIVLIWLVS 180

  Fly   190 LLATVPYGMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTA 254
            .:..:|..:.|:                 .::||               |:.|:.|..:      
Zfish   181 CIMMIPQAVVME-----------------SSSLM---------------PELTNKTSLF------ 207

  Fly   255 GSTGPEMPYVRVYCEENWPSEQYRKVFGAITTTLQFVLPFFIISICYV----------------- 302
                       ..|:|.||.|.|.||:......:.:..|..::.:.|:                 
Zfish   208 -----------TVCDEQWPDEIYPKVYHTCFFIVTYFAPLCLMVLAYIQICHKLWCQQIPGSSSV 261

  Fly   303 ----WISVKLNQRARAKPGSKSSRREEADRDRK-----KRTNRMLIAMVAVFGLSWLPINVVNI- 357
                |.|::.:..|.....|...|......:.|     ::|.|||:.::.||.|.:|||:::|| 
Zfish   262 LQRQWKSLQCSAHAVGSGESVKVRTSTVSAEAKQVKARRKTARMLMVVLFVFALCYLPISILNIM 326

  Fly   358 ---FDDFDDKSNEWRFYILFFFVAHSIAMSSTCYNPFLYAWLNENFRKEFKHVLPC--------- 410
               |..|.:..|....|..|.| :|.:..:::..||.:|.:|:..||:|||....|         
Zfish   327 KRVFGAFKNTGNRETVYAWFTF-SHWLIYANSAANPIIYNFLSGKFREEFKAAFICQCSGRGETH 390

  Fly   411 ---------------FNPSNNNIINITR 423
                           .:...||:.||:|
Zfish   391 KQRARGRTSTDSRKSLSTQVNNLDNISR 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 41/120 (34%)
7tm_1 80..393 CDD:278431 85/342 (25%)
hcrtr2NP_001073337.1 7tm_4 65..>185 CDD:304433 42/119 (35%)
7tm_1 71..364 CDD:278431 85/342 (25%)
Orexin_rec2 390..>424 CDD:281778 5/29 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3808
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.940

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