DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and sstr2b

DIOPT Version :10

Sequence 1:NP_524176.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:XP_017210358.2 Gene:sstr2b / 560530 ZFINID:ZDB-GENE-130530-727 Length:373 Species:Danio rerio


Alignment Length:373 Identity:111/373 - (29%)
Similarity:170/373 - (45%) Gaps:85/373 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGRWAFG 132
            |:|..|.|:|:.||.||.||:||...|:|||||:|.|||::|||. :|::||..:...|..|.||
Zfish    53 VMYFLVCVVGLCGNALVIYVILRYAKMKTVTNIYILNLAVADILF-MLSLPFIAIQLAMVHWPFG 116

  Fly   133 RSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPF------HPRMKLSTCIGIIVSIWVIALL 191
            .::||:|......:.:.|...|..::||||..:::|.      .|::..:|    .|::||::||
Zfish   117 ATMCHVVITIDSLNQFTSIFCLMVMSIDRYLAVVHPMKSIKWRKPQVAKAT----NVAVWVVSLL 177

  Fly   192 ATVPYGMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGS 256
            ..:|...|                                 ||.|...:.               
Zfish   178 VILPVVFY---------------------------------SGLITKAEG--------------- 194

  Fly   257 TGPEMPYVRVYCEENWPSEQ--YRKVFGAITTTLQFVLPFFIISICYVWISVKLNQRARAKPGSK 319
                     .:|...||..|  |:..|...|..|.|.||..:|.:||:.|.:|:.     ..|.|
Zfish   195 ---------CFCSIVWPDPQGAYQTAFMIYTFLLGFFLPLMVICLCYLLIIIKVK-----SSGIK 245

  Fly   320 --SSRREEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDDKSNEWRFYILFFFVAHSIA 382
              ||:|    |..:|:..|::..:|.||...|||..:.|:.......|:......:|.||. .:.
Zfish   246 VSSSKR----RYSEKKVTRLVSVVVLVFVFCWLPFYIFNMTSVTGTISDTPFLRSVFAFVV-VLG 305

  Fly   383 MSSTCYNPFLYAWLNENFRKEFKHVLPCFNPSNNNIINITRGYNRSDR 430
            .:::|.||.|||:|:|||||.|::|| ||  ....:.:..|..:|.||
Zfish   306 YANSCANPILYAFLSENFRKSFQNVL-CF--KKEALSDAARSNSRLDR 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_524176.1 7tmA_NPYR-like 64..404 CDD:320331 102/345 (30%)
TM helix 1 65..91 CDD:320331 12/22 (55%)
TM helix 2 98..123 CDD:320331 13/24 (54%)
TM helix 3 136..166 CDD:320331 9/29 (31%)
TM helix 4 177..198 CDD:320331 7/20 (35%)
TM helix 5 278..307 CDD:320331 10/28 (36%)
TM helix 6 329..359 CDD:320331 9/29 (31%)
TM helix 7 372..397 CDD:320331 9/24 (38%)
sstr2bXP_017210358.2 None

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