DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and Qrfprl

DIOPT Version :10

Sequence 1:NP_524176.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001102709.1 Gene:Qrfprl / 500157 RGDID:1560028 Length:415 Species:Rattus norvegicus


Alignment Length:493 Identity:115/493 - (23%)
Similarity:195/493 - (39%) Gaps:168/493 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 NWSLTSPGTTSAILADVAASDEDRSGGIIHN----QFV------------------QIFFYVLYA 71
            :|:||:. ..||:|.             :||    ||:                  ::...:...
  Rat     2 SWNLTAE-QLSALLQ-------------LHNLTRAQFIARYGLRPLVLTPQLPARARLALLLAGL 52

  Fly    72 TVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGRWAFGRSLC 136
            .:|.|.:|||.||.|||.|::||:|||||||.:|||||:|:....:|.|.|......|..|..:|
  Rat    53 LIFALALFGNALVVYVVTRSKAMRTVTNIFICSLALSDLLIVFFCIPVTMLQNVSDTWLGGAFIC 117

  Fly   137 HLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPF-----HPRMKLSTCIGIIVSIWVIALLATVPY 196
            .:|.|.|..::....||:|.||::|:..:::||     :...:..|.:|:   :|::|::...|.
  Rat   118 KMVPFVQCTAVVTEILTMTCIAVERHQGLVHPFKMKQQYTNQRAFTMLGV---VWLVAIIIGSPM 179

  Fly   197 GMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGSTGPEM 261
            ....::                                                         |:
  Rat   180 WHVQRL---------------------------------------------------------EI 187

  Fly   262 PYVRVY------CEENWPSEQYRKVFGAITTTLQFVLPFFIISICYVWISVKLNQRARAKPGS-- 318
            .|..:|      |.|.|.|..::|::........|:||..::|:.|..|..:|..:.|...||  
  Rat   188 KYDFLYEKEHICCLEEWSSPVHQKIYTTFILVTLFLLPLLLLSVLYGKIGYELWIKKRVGDGSVL 252

  Fly   319 ---------KSSRREEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNI---FDDFDDKSNEWRFY 371
                     |.:|       :|||...|::.:|.:|.:.|.|.:||::   :.:|:.:.:|....
  Rat   253 RTIHGKEMFKIAR-------KKKRAVIMMVTVVVLFAVCWAPFHVVHMMIEYSNFEKEYDEVTIK 310

  Fly   372 ILFFFVAHSIAMSSTCYNPFLYAWLNENFRKEFKHVLPCFNPSNNNIINITRGYNRSDRNTCGPR 436
            ::|..|......:|.| ||.:||.:||||:|.|...: |:     .:|          :.|..|.
  Rat   311 MIFAIVQIIGFFNSIC-NPIVYALMNENFKKNFVSAV-CY-----CVI----------KETPSPA 358

  Fly   437 LHHG----------------------KGDGGMGGGSLD 452
            ..||                      ||: ..||.::|
  Rat   359 QRHGSLGAIVMHRRVKLAVGENPVEIKGE-AFGGSNMD 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_524176.1 7tmA_NPYR-like 64..404 CDD:320331 93/364 (26%)
TM helix 1 65..91 CDD:320331 10/25 (40%)
TM helix 2 98..123 CDD:320331 13/24 (54%)
TM helix 3 136..166 CDD:320331 10/29 (34%)
TM helix 4 177..198 CDD:320331 5/20 (25%)
TM helix 5 278..307 CDD:320331 7/28 (25%)
TM helix 6 329..359 CDD:320331 10/32 (31%)
TM helix 7 372..397 CDD:320331 8/24 (33%)
QrfprlNP_001102709.1 7tmA_QRFPR 60..342 CDD:320333 91/349 (26%)
TM helix 2 79..105 CDD:320333 14/25 (56%)
TM helix 3 117..147 CDD:320333 10/29 (34%)
TM helix 4 160..181 CDD:320333 5/23 (22%)
TM helix 5 210..235 CDD:320333 6/24 (25%)
TM helix 6 265..295 CDD:320333 11/36 (31%)
TM helix 7 310..335 CDD:320333 8/25 (32%)

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