DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and CG4313

DIOPT Version :9

Sequence 1:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_569971.3 Gene:CG4313 / 31169 FlyBaseID:FBgn0025632 Length:541 Species:Drosophila melanogaster


Alignment Length:487 Identity:100/487 - (20%)
Similarity:170/487 - (34%) Gaps:155/487 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 YVLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGR-WA 130
            :|......::||.||:|....:.|.|..:..|.|||.||:.||:|.....:|.. ..||..| |.
  Fly    81 WVACIVFIIVGVPGNLLTIVALSRGRQTRNSTAIFIINLSCSDLLFGCFNLPLA-ASTFKERAWT 144

  Fly   131 FGRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYP-FHPRMKLSTCIGIIVS-IWVIALLAT 193
            ....||.|....:...:.:|.|:::.|.|:||.:|.:| .:||:.....:.::|: .|:......
  Fly   145 HSDLLCRLFPMLRYGLLAVSLLSVSLITINRYIIIAHPRQYPRIYQRRYLALMVAGTWITTFSIM 209

  Fly   194 VP--------YGMYMKMTNELVNGTQTG---NETLVEATLML-----------------NGSFVA 230
            :|        :|:.:.:.:..:...:.|   .|.|..|..|:                 ..:..|
  Fly   210 IPTWRGVWGIFGLDVSIGSCSIMHDRYGRSPKEFLFIAAFMVPCICIVICYARIFLLVRKAAIRA 274

  Fly   231 QGSGFIEAPDST--SATQAYMQVMTAGSTGPE---------------MPYV----RVYCEENWPS 274
            ..:|.....|.|  ||.|..:|.| |....||               .|:|    ..|.::|   
  Fly   275 GTAGKTNVSDVTPSSAPQHQIQAM-ATPKKPEKVTTSSGEANEPIAGRPFVVEENLAYIDDN--- 335

  Fly   275 EQYRKVFGAITTTLQFVLPFFIISICYVWISVKLNQRARAKPGSKSS-----RREEADRDRKK-- 332
                    |.|.:|         .|.|   |::...:.:..|...::     |.:|.|||::|  
  Fly   336 --------ASTDSL---------PISY---SIRRRDQDQQPPPVDANVVLKEREKERDRDQEKVS 380

  Fly   333 -----------------------RT---------------------------------NRMLIAM 341
                                   ||                                 :|.|:.|
  Fly   381 LGRSQTQLEMGKTHGKNPITTSLRTTSFTRFSPRKSHYASMGNTSNASSIYPGRMSAKDRRLLKM 445

  Fly   342 VAV----FGLSWLPINVVNIFDDFDDKSNEWRFYILFFFVAHSIAMSSTCYNPFLYAWLNENFRK 402
            :.|    |.:.:|||.|..|:....:.  .|     |....:.:...:||.||.:|..::..:|:
  Fly   446 ILVIFVWFVICYLPITVAKIWKSATEV--HW-----FNIAGYLLIYLTTCINPLIYVLMSSEYRR 503

  Fly   403 EFKHVLPCF----NPSNNNIINITRGYNRSDR 430
            .:.::|.|.    .....|..|..|.:..|:|
  Fly   504 AYWNLLRCHGSPDTQKQRNQANAKRKHLESNR 535

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 37/131 (28%)
7tm_1 80..393 CDD:278431 88/431 (20%)
CG4313NP_569971.3 7tm_4 88..>197 CDD:304433 34/109 (31%)
7tm_1 94..>273 CDD:278431 41/179 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45459158
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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