DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and Pgr15l

DIOPT Version :9

Sequence 1:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001100053.1 Gene:Pgr15l / 296867 RGDID:1562685 Length:456 Species:Rattus norvegicus


Alignment Length:426 Identity:124/426 - (29%)
Similarity:192/426 - (45%) Gaps:111/426 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NLSWLSTITTTSSSISTSQLPLVSTTNWSLTSP-GTTSAILADVAASDEDRSGGIIHNQFVQIFF 66
            |:||:.:|...|.:.:|.....:|:..|.  .| ||.:..|           ||..| ...:|..
  Rat    25 NVSWVPSIEDQSCNHTTQNGTNISSAEWG--GPRGTVTKWL-----------GGNPH-IMAKIVL 75

  Fly    67 YVLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGRWAF 131
            ...||.:.|:.:|||.|||.|.::::..:..|.:.|.|||:||||:.:|..||.......|:|.|
  Rat    76 TFAYAVIIVISLFGNSLVCQVFVKHKETKKSTGLLIFNLAISDILIILLNSPFALARFLSGQWVF 140

  Fly   132 GRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIGIIVSIWVIALLATVPY 196
            ||.:||:..|||.||:::|||||.::|:||:.||::|..||:..|..:.::..||.||:...:|:
  Rat   141 GRIMCHVSRFAQYCSLHVSTLTLMAVAMDRHRVILHPMKPRLTHSQSLFVVGVIWSIAVFLALPH 205

  Fly   197 GMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGSTGPEM 261
            .:|..:.. |||               ::|.                                  
  Rat   206 AIYQNLFT-LVN---------------MDGD---------------------------------- 220

  Fly   262 PYVRVYCEENW--PSEQYRKVFGAITTTLQFVLPFFIISICY------VWISVKLNQRARAKPGS 318
              ||.||..::  ||....|.....|..|.::||..:|...|      :||...:        |.
  Rat   221 --VRSYCLPSFPGPSTLVSKYVDLGTFILLYILPLLVIVGTYSHLGKRLWIQNAI--------GD 275

  Fly   319 KSSRREEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDDKSNEWRFYI----------- 372
            .|:|:..|...::|::.||||.:|.||.:.|.|:|                ||:           
  Rat   276 ASARQLMAHYQKRKKSIRMLILIVLVFAVCWFPLN----------------FYVVLISSAGVEND 324

  Fly   373 -LFFFVAHSIAMSSTCYNPFLYAWLNENFRKEFKHV 407
             :.|:..|..||||||||||:|.|||.:||.:.:.:
  Rat   325 SVIFYAFHWFAMSSTCYNPFIYCWLNRSFRAKLRSI 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 50/120 (42%)
7tm_1 80..393 CDD:278431 98/332 (30%)
Pgr15lNP_001100053.1 7tm_4 83..360 CDD:304433 106/352 (30%)
7tm_1 89..346 CDD:278431 98/332 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102619
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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