DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and Npy1r

DIOPT Version :9

Sequence 1:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001106828.1 Gene:Npy1r / 29358 RGDID:3198 Length:382 Species:Rattus norvegicus


Alignment Length:359 Identity:110/359 - (30%)
Similarity:172/359 - (47%) Gaps:71/359 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 HNQFVQIFFYVL-YATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTP 121
            |.....||...| |..|.:|||.||:.:..::|:.:.|:.||||.|.||:.||:|:.|:.:|||.
  Rat    33 HLPLAVIFTLALAYGAVIILGVSGNLALIIIILKQKEMRNVTNILIVNLSFSDLLVAVMCLPFTF 97

  Fly   122 LYTFMGRWAFGRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYP--FHPRMKLSTCIGIIVS 184
            :||.|..|.||.::|.|..|.|..||.:|..:|..||::|:.:||.|  :.|..: ...|||.| 
  Rat    98 VYTLMDHWVFGETMCKLNPFVQCVSITVSIFSLVLIAVERHQLIINPRGWRPNNR-HAYIGITV- 160

  Fly   185 IWVIALLATVPYGMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYM 249
            |||:|:.:::|:.:|..:|:|                                 |....:..|:.
  Rat   161 IWVLAVASSLPFVIYQILTDE---------------------------------PFQNVSLAAFK 192

  Fly   250 QVMTAGSTGPEMPYVRVYCEENWPSEQYRKVFGAITTTLQFVLPFFIISICYVWISVKLNQRARA 314
            .           .||   |.:.:||:.:|..:..:...||:..|...|.|||..|.|:|.:|...
  Rat   193 D-----------KYV---CFDKFPSDSHRLSYTTLLLVLQYFGPLCFIFICYFKIYVRLKRRNNM 243

  Fly   315 KPGSKSSRREEADRDRKKRTNRMLIAMVAVFGLSWLPINVVN-IFDDFDDKSNEWRFYI------ 372
            ....:.|:...::   .||.|.||:::|..|.:.|||:.:.| :||        |...|      
  Rat   244 MDKIRDSKYRSSE---TKRINVMLLSIVVAFAVCWLPLTIFNTVFD--------WNHQIIATCNH 297

  Fly   373 -LFFFVAHSIAMSSTCYNPFLYAWLNENFRKEFK 405
             |.|.:.|..||.|||.||..|.:||:||:::.:
  Rat   298 NLLFLLCHLTAMISTCVNPIFYGFLNKNFQRDLQ 331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 50/122 (41%)
7tm_1 80..393 CDD:278431 96/322 (30%)
Npy1rNP_001106828.1 7tmA_NPY1R 40..330 CDD:320517 108/349 (31%)
TM helix 1 42..66 CDD:320517 8/23 (35%)
TM helix 2 75..97 CDD:320517 11/21 (52%)
TM helix 3 113..135 CDD:320517 8/21 (38%)
TM helix 4 156..172 CDD:320517 8/16 (50%)
TM helix 5 208..231 CDD:320517 6/22 (27%)
TM helix 6 261..283 CDD:320517 8/21 (38%)
TM helix 7 298..323 CDD:320517 11/24 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24235
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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