DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and PRLHR

DIOPT Version :9

Sequence 1:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_004239.2 Gene:PRLHR / 2834 HGNCID:4464 Length:370 Species:Homo sapiens


Alignment Length:411 Identity:132/411 - (32%)
Similarity:204/411 - (49%) Gaps:70/411 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSTITTTSSSIST--SQLPLVSTT--NWSL-TSPGTTSAILADVAASDEDRSGGIIHNQFVQIFF 66
            :::.||....:|.  |.||...||  |.|. .|.|..|...||..|....:|..::|.  ::...
Human     1 MASSTTRGPRVSDLFSGLPPAVTTPANQSAEASAGNGSVAGADAPAVTPFQSLQLVHQ--LKGLI 63

  Fly    67 YVLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGR-WA 130
            .:||:.|.|:|:.||.|:..|:.|.|.:..|||..|.||||||:|:|...||.|..|.|..| |.
Human    64 VLLYSVVVVVGLVGNCLLVLVIARVRRLHNVTNFLIGNLALSDVLMCTACVPLTLAYAFEPRGWV 128

  Fly   131 FGRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIGIIVSIWVIALLATVP 195
            ||..|||||.|.|..::|:|..|||:||:|||.|:::|...|:.|......:::||.::.:..:|
Human   129 FGGGLCHLVFFLQPVTVYVSVFTLTTIAVDRYVVLVHPLRRRISLRLSAYAVLAIWALSAVLALP 193

  Fly   196 YGMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGSTGPE 260
                                                           :|...|...:        
Human   194 -----------------------------------------------AAVHTYHVEL-------- 203

  Fly   261 MPYVRVYCEENWPSEQYRK---VFGAITTTLQFVLPFFIISICYVWISVKLNQRARAKPGSKSSR 322
            .|:....|||.|.|::.::   .:|.:..|  ::||..:|.:.||.:||||  |.|..||..:..
Human   204 KPHDVRLCEEFWGSQERQRQLYAWGLLLVT--YLLPLLVILLSYVRVSVKL--RNRVVPGCVTQS 264

  Fly   323 REEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDDKSNEWRFYILFFFVAHSIAMSSTC 387
            :.:.||.|::||..:|:.:|.||.:.|||::|.|:..|.|..:.:...:.|...:.|.:||||.|
Human   265 QADWDRARRRRTFCLLVVIVVVFAVCWLPLHVFNLLRDLDPHAIDPYAFGLVQLLCHWLAMSSAC 329

  Fly   388 YNPFLYAWLNENFRKEFKHVL 408
            ||||:||||:::||:|.:.:|
Human   330 YNPFIYAWLHDSFREELRKLL 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 52/121 (43%)
7tm_1 80..393 CDD:278431 101/316 (32%)
PRLHRNP_004239.2 7tmA_PrRP_R 77..346 CDD:320516 107/327 (33%)
TM helix 2 95..120 CDD:320516 14/24 (58%)
TM helix 3 134..164 CDD:320516 17/29 (59%)
TM helix 4 175..196 CDD:320516 3/67 (4%)
TM helix 5 222..251 CDD:320516 8/30 (27%)
TM helix 6 271..301 CDD:320516 12/29 (41%)
TM helix 7 314..339 CDD:320516 14/24 (58%)
Required for interaction with GRIP1, GRIP2 and PICK1. /evidence=ECO:0000269|PubMed:11641419 365..370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3134
Inparanoid 1 1.050 230 1.000 Inparanoid score I3443
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1072979at2759
OrthoFinder 1 1.000 - - FOG0004089
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24235
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3808
SonicParanoid 1 1.000 - - X589
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1010.060

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