DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and Grpr

DIOPT Version :10

Sequence 1:NP_524176.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_036838.2 Gene:Grpr / 24938 RGDID:2750 Length:384 Species:Rattus norvegicus


Alignment Length:389 Identity:99/389 - (25%)
Similarity:170/389 - (43%) Gaps:78/389 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 NQFVQIFFYVL---YATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFT 120
            |.|.....||:   |..:.|:|:.||:.:..:....::|:.|.|:||::|||.|:||.|...|..
  Rat    34 NWFHPGIIYVIPAVYGLIIVIGLIGNITLIKIFCTVKSMRNVPNLFISSLALGDLLLLVTCAPVD 98

  Fly   121 PLYTFMGRWAFGRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPF-----HPRMKLSTCIG 180
            .......||.|||..|.|:.|.|..|:.:|..|||:::.|||..|:.|.     |..||:  |:.
  Rat    99 ASKYLADRWLFGRIGCKLIPFIQLTSVGVSVFTLTALSADRYKAIVRPMDIQASHALMKI--CLK 161

  Fly   181 IIVSIWVIALLATVPYGMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSAT 245
            ..: ||::::|..:|..::..:....|..|   |:|.:...                        
  Rat   162 AAL-IWIVSMLLAIPEAVFSDLHPFHVKDT---NQTFISCA------------------------ 198

  Fly   246 QAYMQVMTAGSTGPEMPYVRVYCEENWPSEQYRKVFGAITTTLQFVLPFFIISICYVWISVKLNQ 310
                            ||..       .:|.:.|:....:..:.:::|..|||:.|.:|:..|.|
  Rat   199 ----------------PYPH-------SNELHPKIHSMASFLVFYIIPLSIISVYYYFIARNLIQ 240

  Fly   311 RARAKP--GSKSSRREEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFD----DKSNEWR 369
            .|...|  |:...:::...|   ||..:.::..|.:|...|||.:|:.::..:.    |.|   .
  Rat   241 SAYNLPVEGNIHVKKQIESR---KRLAKTVLVFVGLFAFCWLPNHVIYLYRSYHYSEVDTS---M 299

  Fly   370 FYILFFFVAHSIAMSSTCYNPFLYAWLNENFRKEFKHVLPCFNPSNNNIINITRGYNRSDRNTC 433
            .:.:....|..:|.:::|.|||....|:::|||:|...|.|..||   ::|.:....||  .||
  Rat   300 LHFITSICARLLAFTNSCVNPFALYLLSKSFRKQFNTQLLCCQPS---LLNRSHSTGRS--TTC 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_524176.1 7tmA_NPYR-like 64..404 CDD:320331 87/353 (25%)
TM helix 1 65..91 CDD:320331 7/28 (25%)
TM helix 2 98..123 CDD:320331 11/24 (46%)
TM helix 3 136..166 CDD:320331 12/29 (41%)
TM helix 4 177..198 CDD:320331 5/20 (25%)
TM helix 5 278..307 CDD:320331 7/28 (25%)
TM helix 6 329..359 CDD:320331 8/29 (28%)
TM helix 7 372..397 CDD:320331 6/24 (25%)
GrprNP_036838.2 7tmA_GRPR 42..334 CDD:320252 87/350 (25%)
TM helix 1 43..69 CDD:320252 6/25 (24%)
TM helix 2 76..102 CDD:320252 11/25 (44%)
TM helix 3 114..144 CDD:320252 12/29 (41%)
TM helix 4 156..176 CDD:320252 6/22 (27%)
TM helix 5 208..233 CDD:320252 6/24 (25%)
TM helix 6 258..288 CDD:320252 9/32 (28%)
TM helix 7 302..327 CDD:320252 6/24 (25%)

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