DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and Pgr15l

DIOPT Version :9

Sequence 1:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001028533.1 Gene:Pgr15l / 245526 MGIID:2676330 Length:456 Species:Mus musculus


Alignment Length:425 Identity:122/425 - (28%)
Similarity:194/425 - (45%) Gaps:109/425 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NLSWLSTITTTSSSISTSQLPLVSTTNWSLTSPGTTSAILADVAASDEDRSGGIIHNQFVQIFFY 67
            |:||:.:|...|.:.:|.....:|:..|.    |.|.::...:        ||..| ...:|...
Mouse    25 NISWVPSIEDQSCNHTTQNGTNISSAEWG----GPTGSVRRWL--------GGNPH-IMAKIVLT 76

  Fly    68 VLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGRWAFG 132
            ..||.:.|:.:|||.|||.|.::::.::..|.:.|.|||:||||:.:|..||.......|:|.||
Mouse    77 FAYAVIIVISLFGNSLVCQVFVKHKEIKKSTGLLIFNLAISDILIILLNSPFALARFLSGQWVFG 141

  Fly   133 RSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIGIIVSIWVIALLATVPYG 197
            |.:||:..|||.||:::|||||.::|:||:.||::|..||:..|.|:.::..||.||:...:|:.
Mouse   142 RIMCHVSRFAQYCSLHVSTLTLMAVAMDRHRVILHPMKPRLTHSQCLFVVAMIWSIAVFLALPHA 206

  Fly   198 MYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGSTGPEMP 262
            :|..:.. |||               ::|.                                   
Mouse   207 IYQNLFT-LVN---------------MDGD----------------------------------- 220

  Fly   263 YVRVYCEENW--PSEQYRKVFGAITTTLQFVLPFFIISICY------VWISVKLNQRARAKPGSK 319
             .|.||..::  ||....|.....|..|.::||..:|.:.|      :||...:        |..
Mouse   221 -TRSYCLPSFPGPSILVSKYVDLGTFILLYILPLLVIVVTYSHLGKRLWIQNAI--------GDA 276

  Fly   320 SSRREEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDDKSNEWRFYI------------ 372
            |:|:..|...::|::.||||.:|.||.:.|.|:|                ||:            
Mouse   277 SARQLMAHYQKRKKSIRMLILIVLVFAVCWFPLN----------------FYVVLISSAGVENDS 325

  Fly   373 LFFFVAHSIAMSSTCYNPFLYAWLNENFRKEFKHV 407
            :.|:..|..||||||||||:|.|||.:||.:.:.:
Mouse   326 VLFYAFHWFAMSSTCYNPFIYCWLNRSFRAKLRSI 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 51/120 (43%)
7tm_1 80..393 CDD:278431 98/332 (30%)
Pgr15lNP_001028533.1 7tm_4 83..360 CDD:304433 106/352 (30%)
7tm_1 89..346 CDD:278431 98/332 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm43799
orthoMCL 1 0.900 - - OOG6_102619
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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