DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sNPF-R and Mtnr1b

DIOPT Version :10

Sequence 1:NP_524176.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_663758.2 Gene:Mtnr1b / 244701 MGIID:2181726 Length:364 Species:Mus musculus


Alignment Length:349 Identity:86/349 - (24%)
Similarity:152/349 - (43%) Gaps:76/349 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LYATVFV----LGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGRW 129
            :.:||.|    :...||:||...|||||.::...|:|:.:|||:|:::.:...|...:......|
Mouse    42 MLSTVVVVTTAVDFVGNLLVILSVLRNRKLRNAGNLFVVSLALADLVIALYPYPLILVAIIRDGW 106

  Fly   130 AFGRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIY--PFHPRMKLSTCIGIIVS-IWVIALL 191
            ..|.:.|...:|..|.|:..|...:|:|||:||..|.:  .:| |:.......|.:| :|::.|:
Mouse   107 VLGEAHCKASAFVMGLSVIGSVFNITAIAINRYCCICHSTTYH-RVCSHWYTPIYISLVWLLTLV 170

  Fly   192 ATVPYGMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGS 256
            |.||        |..| |:...:..:...|             ||:    |::||          
Mouse   171 ALVP--------NFFV-GSLEYDPRIYSCT-------------FIQ----TASTQ---------- 199

  Fly   257 TGPEMPYVRVYCEENWPSEQYRKVFGAITTTLQFVLPFFIISICY--VWISVKLNQRARAKPGSK 319
                                    :.|....:.|:||..::|.||  :|:.| |..|.:||    
Mouse   200 ------------------------YTAAVVAIHFLLPMAVVSFCYLRIWVLV-LQARRKAK---- 235

  Fly   320 SSRREEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDDKSNEWRFYILFFFVAHSIAMS 384
             :.|:...|....|:...:.|:..||.:.|.|:|.:.:....:.::...:.....|..::.:|..
Mouse   236 -AERKLRLRPSDLRSFLTMFAVFVVFAICWAPLNCIGLAVAINPEAMALQVPEGLFVTSYFLAYF 299

  Fly   385 STCYNPFLYAWLNENFRKEFKHVL 408
            ::|.|..:|..||:|||:|:|.:|
Mouse   300 NSCLNAIVYGLLNQNFRREYKRIL 323

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_524176.1 7tmA_NPYR-like 64..404 CDD:320331 83/343 (24%)
TM helix 1 65..91 CDD:320331 9/25 (36%)
TM helix 2 98..123 CDD:320331 7/24 (29%)
TM helix 3 136..166 CDD:320331 11/29 (38%)
TM helix 4 177..198 CDD:320331 7/21 (33%)
TM helix 5 278..307 CDD:320331 8/30 (27%)
TM helix 6 329..359 CDD:320331 7/29 (24%)
TM helix 7 372..397 CDD:320331 5/24 (21%)
Mtnr1bNP_663758.2 7tm_GPCRs 41..319 CDD:475119 83/343 (24%)
TM helix 1 43..67 CDD:410628 8/23 (35%)
TM helix 2 76..98 CDD:410628 7/21 (33%)
TM helix 3 114..136 CDD:410628 6/21 (29%)
TM helix 4 159..175 CDD:410628 7/23 (30%)
TM helix 5 198..221 CDD:410628 8/56 (14%)
TM helix 6 250..272 CDD:410628 6/21 (29%)
TM helix 7 287..312 CDD:410628 5/24 (21%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 343..364
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.