DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sNPF-R and Npbwr1

DIOPT Version :10

Sequence 1:NP_524176.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_034472.1 Gene:Npbwr1 / 226304 MGIID:891989 Length:329 Species:Mus musculus


Alignment Length:349 Identity:82/349 - (23%)
Similarity:146/349 - (41%) Gaps:72/349 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 VLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGRWAFG 132
            |:|..:..:|:.||..|.||:||...|:||||:||.|||::|.|. .|.:|.......:.||.||
Mouse    44 VVYGVICAVGLAGNSAVLYVLLRTPRMKTVTNVFILNLAIADELF-TLVLPINIADFLLRRWPFG 107

  Fly   133 RSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIG----IIVSIWVIALLAT 193
            ..:|.|:......:.:.|...|..::.|||.|::.....|.......|    :.:::|.:..|..
Mouse   108 EVMCKLIVAVDQYNTFSSLYFLAVMSADRYLVVLATAESRRVSGRTYGAARAVSLAVWALVTLVV 172

  Fly   194 VPYGMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGSTG 258
            :|:.::.::..|                         ||                          
Mouse   173 LPFAVFARLDEE-------------------------QG-------------------------- 186

  Fly   259 PEMPYVRVYCEENWPSEQ--YRKVFGAITTTLQFVLPFFIISICYVWISVKLNQRARAKPGSKSS 321
                  |..|...:|..:  :.:.....|..|.|.:|  :.:||.::.::....||.    ...|
Mouse   187 ------RRQCVLVFPQPEAFWWRASRLYTLVLGFAIP--VTTICALYTTLLCRLRAI----QLDS 239

  Fly   322 RREEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDDKSNEWRFYILFFFVAHSIAMSST 386
            ..:..|| .|||...::.|::||..|.|.|.::..|.....|.........:.:|:. |::.:::
Mouse   240 HAKALDR-AKKRVTLLVAAILAVCLLCWTPYHLSTIVALTTDLPQTPLVIGISYFIT-SLSYANS 302

  Fly   387 CYNPFLYAWLNENFRKEFKHVLPC 410
            |.||||||:|:::||:..:.::.|
Mouse   303 CLNPFLYAFLDDSFRRSLRQLVSC 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_524176.1 7tmA_NPYR-like 64..404 CDD:320331 81/341 (24%)
TM helix 1 65..91 CDD:320331 9/22 (41%)
TM helix 2 98..123 CDD:320331 11/24 (46%)
TM helix 3 136..166 CDD:320331 8/29 (28%)
TM helix 4 177..198 CDD:320331 4/24 (17%)
TM helix 5 278..307 CDD:320331 6/28 (21%)
TM helix 6 329..359 CDD:320331 10/29 (34%)
TM helix 7 372..397 CDD:320331 9/24 (38%)
Npbwr1NP_034472.1 7tmA_NPBWR 40..320 CDD:320215 81/341 (24%)
TM helix 1 41..67 CDD:320215 9/22 (41%)
TM helix 2 74..100 CDD:320215 11/26 (42%)
TM helix 3 111..141 CDD:320215 8/29 (28%)
TM helix 4 155..177 CDD:320215 4/21 (19%)
TM helix 5 202..231 CDD:320215 6/30 (20%)
TM helix 6 246..276 CDD:320215 11/30 (37%)
TM helix 7 288..313 CDD:320215 9/25 (36%)

Return to query results.
Submit another query.