DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and Prlhr

DIOPT Version :9

Sequence 1:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_963909.2 Gene:Prlhr / 226278 MGIID:2135956 Length:370 Species:Mus musculus


Alignment Length:408 Identity:136/408 - (33%)
Similarity:206/408 - (50%) Gaps:67/408 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSTITTTSSSISTSQLPLVST-TNWSL-TSPGTTSAILADVAASDEDRSGGIIHNQFVQIFFYVL 69
            |||.||....:|:..||..|| .|.|. .|.|..||.:...||....:|..::|.  ::....:|
Mouse     4 LSTETTGDPDLSSGLLPASSTPANQSAEASEGNLSATVPRAAAVTPFQSLQLVHQ--LKGLIVML 66

  Fly    70 YATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGR-WAFGR 133
            |:.|.|:|:.||.|:..|:.|.|.:..|||..|.||||||:|:|...||.|..|.|..| |.||.
Mouse    67 YSIVVVVGLVGNCLLVLVIARVRRLHNVTNFLIGNLALSDVLMCAACVPLTLAYAFEPRGWVFGG 131

  Fly   134 SLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIGIIVSIWVIALLATVPYGM 198
            .|||||.|.|..::|:|..|||:||:|||.|:::|...|:.|......::.||.::.:..:|   
Mouse   132 GLCHLVFFLQPVTVYVSVFTLTTIALDRYVVLVHPLRRRISLRLSAYAVLGIWALSAVLALP--- 193

  Fly   199 YMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGSTGPEMPY 263
                                                        :|...|...:        .|:
Mouse   194 --------------------------------------------AAVHTYHVEL--------KPH 206

  Fly   264 VRVYCEENWPS-EQYRKVF--GAITTTLQFVLPFFIISICYVWISVKLNQRARAKPGSKSSRREE 325
            ....|||.|.| |:.|:::  |.:..|  ::||...|.:.||.:||||  |.|..|||.:..:.:
Mouse   207 DVSLCEEFWGSQERQRQIYAWGLLLGT--YLLPLLAILLSYVRVSVKL--RNRVVPGSVTQSQAD 267

  Fly   326 ADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDDKSNEWRFYILFFFVAHSIAMSSTCYNP 390
            .||.|::||..:|:.:|.||.:.|||:::.|:..|.|.::.:...:.|...:.|.:||||.||||
Mouse   268 WDRARRRRTFCLLVVVVVVFAVCWLPLHIFNLLRDLDPRAIDPYAFGLVQLLCHWLAMSSACYNP 332

  Fly   391 FLYAWLNENFRKEFKHVL 408
            |:||||:::||:|.:.:|
Mouse   333 FIYAWLHDSFREELRKML 350

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 52/121 (43%)
7tm_1 80..393 CDD:278431 103/316 (33%)
PrlhrNP_963909.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33 12/28 (43%)
7tmA_PrRP_R 61..346 CDD:320516 114/343 (33%)
TM helix 1 62..88 CDD:320516 9/25 (36%)
TM helix 2 95..120 CDD:320516 14/24 (58%)
TM helix 3 134..164 CDD:320516 17/29 (59%)
TM helix 4 175..196 CDD:320516 3/67 (4%)
TM helix 5 222..251 CDD:320516 9/30 (30%)
TM helix 6 271..301 CDD:320516 11/29 (38%)
TM helix 7 314..339 CDD:320516 14/24 (58%)
Required for interaction with GRIP1, GRIP2 and PICK1. /evidence=ECO:0000250 365..370
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H3134
Inparanoid 1 1.050 237 1.000 Inparanoid score I3373
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0004089
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24235
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3808
SonicParanoid 1 1.000 - - X589
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1010.050

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