DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and npr-22

DIOPT Version :9

Sequence 1:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001023541.1 Gene:npr-22 / 190424 WormBaseID:WBGene00022004 Length:434 Species:Caenorhabditis elegans


Alignment Length:488 Identity:121/488 - (24%)
Similarity:209/488 - (42%) Gaps:145/488 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SWLSTITTTSSSI------STSQLPLVSTTN--WSLTSPGTTSAILADVAASDEDRSGGIIHNQF 61
            |.||.||||:|.|      :|::.|.|...|  :.||..                          
 Worm    10 SLLSRITTTASEIMMRNEPTTTENPAVQEMNHIYHLTPS-------------------------- 48

  Fly    62 VQIFFYVLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFM 126
            :::...:.|:.:.|..|:|||||..|::..:.::|.|||.|.|||::|:|:.|..:||:.....:
 Worm    49 MKMLCILFYSILCVCCVYGNVLVILVIVYFKRLRTATNILILNLAVADLLISVFCIPFSYWQVLI 113

  Fly   127 ---GRWAFGRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLS--TCIGIIVSIW 186
               .||.||..:|.|::|.|..::::|..||..|:.||:..|::...|.::::  ..:.::.:.|
 Worm   114 YDDQRWLFGSMMCSLLAFLQAMAVFLSAWTLVVISFDRWMAIMFLLTPNIRITRRRALYLVAATW 178

  Fly   187 VIALLATVPYGMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQV 251
            :.::|..:|                          |:....|.....|.   |:           
 Worm   179 IFSILMALP--------------------------LLFTTRFFEDQDGL---PN----------- 203

  Fly   252 MTAGSTGPEMPYVRVYCEENW-----PSEQYRKVFGAITTTLQFVLPFFIISICYVWISVKL-NQ 310
                            |.|||     ..||.|||:.::...||:|:|..::.|.|..|.:|: |.
 Worm   204 ----------------CGENWTYFGDSGEQVRKVYSSMVLILQYVVPQAVLIITYTHIGIKMWNS 252

  Fly   311 RARAKPGSKSSRREEADRDRKKRTNR---MLIAMVAVFGLSWLPINV-VNIFDDFDDKSNEWRFY 371
            |.   ||.::...::...||.:...:   |:|.:.|:|.|.|||:.: :|:..:|....|.|.:.
 Worm   253 RV---PGMQNGATKKMIVDRHESVKKLVPMVILISALFALCWLPLLILINVIPEFYPDINSWGYI 314

  Fly   372 ILFFFVAHSIAMSSTCYNPFLYAWLNENFRKEF----KHVLPC---------------------- 410
            :..::.||.:|||.:..||.:|...|..||:.|    ..:|||                      
 Worm   315 LYLWWFAHGLAMSHSMVNPIIYFIRNARFREGFCFFSSKLLPCISFKELRLLTDNTSRSFRNRSR 379

  Fly   411 ----FNPSNNN---IINITRGYNRS---DRNTC 433
                .||::::   ..::|| |:||   ||.||
 Worm   380 FSGVINPTSSDEKPATSLTR-YSRSGVLDRQTC 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 39/125 (31%)
7tm_1 80..393 CDD:278431 84/327 (26%)
npr-22NP_001023541.1 7tmA_PR4-like 51..347 CDD:320514 91/354 (26%)
TM helix 1 52..78 CDD:320514 9/25 (36%)
TM helix 2 85..110 CDD:320514 12/24 (50%)
TM helix 3 126..156 CDD:320514 10/29 (34%)
TM helix 4 169..190 CDD:320514 4/46 (9%)
TM helix 5 219..248 CDD:320514 10/28 (36%)
TM helix 6 271..301 CDD:320514 9/29 (31%)
TM helix 7 315..340 CDD:320514 8/24 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102619
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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