DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and npr-5

DIOPT Version :9

Sequence 1:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001024265.1 Gene:npr-5 / 190386 WormBaseID:WBGene00021983 Length:433 Species:Caenorhabditis elegans


Alignment Length:429 Identity:135/429 - (31%)
Similarity:208/429 - (48%) Gaps:79/429 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 ANLSWLSTITTTSSSISTSQLPLVSTTNWSLTSPGTTSAILADVAASDEDRSGGIIHNQFVQIFF 66
            |.:|.:|| |||.|:||.     |.|::   ::.|:...|...:||...|   .|..:.:::..|
 Worm     6 ATISTIST-TTTPSTISN-----VITSH---SNNGSCIQIAEAIAAQGID---DITVDFYIRSIF 58

  Fly    67 YVLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGRWAF 131
            ..||..:||||:|||..|.:.|.||:.:|:..|:|:.||..:|::|...|:|.||.|.....|||
 Worm    59 TFLYGFLFVLGIFGNGGVLWAVARNKRLQSARNVFLLNLIFTDLILVFTAIPVTPWYAMTKDWAF 123

  Fly   132 GRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIGIIVSIWVIALLATVPY 196
            |..:||||..:..||:::::.:||:|::|::..|..|....:.:...:.|...||:::.|..:||
 Worm   124 GSVMCHLVPLSNSCSVFVTSWSLTAISLDKFLHINDPTKQPVSIRQALAITFLIWIVSTLINLPY 188

  Fly   197 GMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGSTGPEM 261
            .|..:                     .::|||..|..                          |.
 Worm   189 LMSFE---------------------HVDGSFYVQPG--------------------------ET 206

  Fly   262 PYVRVYCEE-NWPSEQYRKVFGAITTTLQFVLPFFIISICYVWISVKLN-----QRARAKPGSKS 320
            ||...:|:| ||.||..||::|.....||||:|..:|:.||..|..|::     |.|:.......
 Worm   207 PYCGHFCDEANWQSENSRKIYGTTVMLLQFVVPMAVITYCYFKILQKVSKDMIIQNAQFCQSLTQ 271

  Fly   321 SRREEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDDKSNEWRFYILFFFV--AHSIAM 383
            .:|.:| ..|||:.|.:|||||..|...|||:.::|:..|| .|..||.....||:.  ||.|||
 Worm   272 KQRSDA-TSRKKKVNYILIAMVVTFIGCWLPLTLLNLVKDF-KKEPEWLKRQPFFWAINAHVIAM 334

  Fly   384 SSTCYNPFLYAWLNENFRKEFKHVLPCFNPSNNNIINIT 422
            |...:||.|:.||.   ||:.:..|       :.|:|.|
 Worm   335 SLVVWNPLLFFWLT---RKQKRSGL-------SKILNST 363

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 42/120 (35%)
7tm_1 80..393 CDD:278431 100/320 (31%)
npr-5NP_001024265.1 7tmA_NPYR-like 56..347 CDD:320331 109/339 (32%)
TM helix 1 58..82 CDD:320331 12/23 (52%)
TM helix 2 91..113 CDD:320331 8/21 (38%)
TM helix 3 129..151 CDD:320331 8/21 (38%)
TM helix 4 172..188 CDD:320331 4/15 (27%)
TM helix 5 225..248 CDD:320331 9/22 (41%)
TM helix 6 282..307 CDD:320331 11/24 (46%)
TM helix 7 323..347 CDD:320331 11/23 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163623
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 189 1.000 Inparanoid score I2571
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1072979at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
66.000

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