DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and npr-7

DIOPT Version :9

Sequence 1:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_509570.3 Gene:npr-7 / 185321 WormBaseID:WBGene00018067 Length:380 Species:Caenorhabditis elegans


Alignment Length:354 Identity:102/354 - (28%)
Similarity:169/354 - (47%) Gaps:75/354 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 YATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGRWAFGRS 134
            |..|..|.:.||:.|..:|:..|.|||||||||::::.:|:::...::..|||..:...|.||:.
 Worm    31 YGLVGALSLVGNLAVLLIVICRREMQTVTNIFISSVSAADLVITSFSLWATPLAYYQRVWHFGKY 95

  Fly   135 LCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIGIIVSIWV--IALLATVPYG 197
            :|::||..||.|:....|||.::|:|||.::..||...|...||:.||..||:  .|:|:.:   
 Worm    96 MCYMVSIIQGLSLMWVPLTLAAVALDRYSLVASPFRQPMSKKTCLLIIAGIWMGGFAVLSPM--- 157

  Fly   198 MYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGSTGPEMP 262
              ::|.:                              |::                  |.||   
 Worm   158 --IRMVD------------------------------FVD------------------SYGP--- 169

  Fly   263 YVRVYCEENW--PSEQYRKVFGAITTTLQFVLPFFIISICYVWISVKLNQRAR--AKPGSKSSRR 323
              ..:|.|:|  ..:.||..:|.....::..:|..:||:|:..|:|.||.:.:  ....|.|:..
 Worm   170 --CHFCLESWDHDKQHYRLFYGLSVLVIRSAIPLVLISLCHWRIAVILNTQTKKFQTLRSASTVT 232

  Fly   324 EEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDF------DDKSNEWRFYILFFFVAHSIA 382
            :..|..||:|...:|:|||.:|.:|.||:::.|:..|.      ....:..|.:|.||  .|..|
 Worm   233 QSTDIRRKQRLQTLLLAMVVIFAVSSLPLDLSNVLQDLIVVYQVRPVPDNVRHFIFFF--CHWTA 295

  Fly   383 MSSTCYNPFLYAWLNENFRKEFKHVLPCF 411
            |:.|..||.:||:.|||||::   :..||
 Worm   296 MAGTLLNPLVYAYYNENFRRQ---IQTCF 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 46/122 (38%)
7tm_1 80..393 CDD:278431 90/324 (28%)
npr-7NP_509570.3 7tmA_NPYR-like 25..317 CDD:320331 100/348 (29%)
TM helix 1 27..51 CDD:320331 7/19 (37%)
TM helix 2 60..82 CDD:320331 5/21 (24%)
TM helix 3 98..120 CDD:320331 8/21 (38%)
TM helix 4 141..157 CDD:320331 6/15 (40%)
TM helix 5 186..209 CDD:320331 5/22 (23%)
TM helix 6 241..266 CDD:320331 9/24 (38%)
TM helix 7 285..310 CDD:320331 11/26 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163621
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1072979at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X589
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.950

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