DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment sNPF-R and npr-10

DIOPT Version :10

Sequence 1:NP_524176.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001024487.1 Gene:npr-10 / 183747 WormBaseID:WBGene00008278 Length:365 Species:Caenorhabditis elegans


Alignment Length:349 Identity:116/349 - (33%)
Similarity:167/349 - (47%) Gaps:69/349 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 LYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGRWAFGR 133
            :|..:.|:||.||:||...|:|.:.:|:|.|:||.:|::|||.:.:::...||:..|...|.||.
 Worm    34 IYTIIVVVGVTGNLLVVMSVMRFKVLQSVRNMFIVSLSVSDIFVAIVSGSVTPITAFSKVWLFGG 98

  Fly   134 SLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIGIIVSIWVIALLATVPYGM 198
            .||||:...||.::..||||||:||||||.:|.:|....::....:.:|.....|::..:||  :
 Worm    99 PLCHLLPLLQGTALSFSTLTLTAIAIDRYILICHPTKEPIRKDQALKMISFNSAISVGLSVP--L 161

  Fly   199 YMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGSTGPEMPY 263
            :||                                            |..||...         |
 Worm   162 FMK--------------------------------------------QELMQFRN---------Y 173

  Fly   264 VRVYCEENWPSEQY-RKVFGAITTTLQFVLPFFIISICYVWISVKLNQRARAKPGSKSSRREEAD 327
            ...||.|||..:.| |.|:|.:...:|||.|...|:.||..||:||.:....: ||:.....||.
 Worm   174 CGEYCSENWGPDAYLRSVYGTVVFIIQFVFPLITITFCYASISIKLRRGVFVR-GSQKELMSEAR 237

  Fly   328 R---DRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDD-----KSNEWRFYILFFFVAHSIAMS 384
            |   .|:.|||||||.|...|.|||||....|...|:..     .|.::.|.|:|    |.|:|:
 Worm   238 RQLTQRRLRTNRMLIIMTVTFALSWLPSVGFNFLRDYSALPGIIDSQDYLFGIIF----HCISMT 298

  Fly   385 STCYNPFLYAWLNENFRKEFKHVL 408
            |...|||||.:.||:||..|..:|
 Worm   299 SVIVNPFLYGYCNEHFRAAFAALL 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_524176.1 7tmA_NPYR-like 64..404 CDD:320331 114/343 (33%)
TM helix 1 65..91 CDD:320331 9/21 (43%)
TM helix 2 98..123 CDD:320331 9/24 (38%)
TM helix 3 136..166 CDD:320331 17/29 (59%)
TM helix 4 177..198 CDD:320331 4/20 (20%)
TM helix 5 278..307 CDD:320331 12/28 (43%)
TM helix 6 329..359 CDD:320331 16/29 (55%)
TM helix 7 372..397 CDD:320331 11/24 (46%)
npr-10NP_001024487.1 7tmA_NPYR-like 29..318 CDD:320331 114/343 (33%)
TM helix 1 30..56 CDD:320331 9/21 (43%)
TM helix 2 63..88 CDD:320331 9/24 (38%)
TM helix 3 101..131 CDD:320331 17/29 (59%)
TM helix 4 142..163 CDD:320331 4/22 (18%)
TM helix 5 189..218 CDD:320331 12/28 (43%)
TM helix 6 242..272 CDD:320331 16/29 (55%)
TM helix 7 286..311 CDD:320331 12/28 (43%)

Return to query results.
Submit another query.