DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and npr-3

DIOPT Version :9

Sequence 1:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_502162.1 Gene:npr-3 / 182494 WormBaseID:WBGene00007006 Length:376 Species:Caenorhabditis elegans


Alignment Length:352 Identity:106/352 - (30%)
Similarity:156/352 - (44%) Gaps:67/352 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 NQFVQIFFYVLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLY 123
            || ::..|.:||..|:|..:.||.||.||:..|:...:|..:|:..||.||:|:|:.::|.|.:.
 Worm    22 NQ-IRAIFSLLYLLVWVGAIVGNTLVLYVLTFNQVSLSVRTVFVGCLAGSDLLMCLFSLPITAIS 85

  Fly   124 TFMGRWAFGRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIGIIVSIWVI 188
            .|...|.|....|.|:...||.:|::|:.|||.||:||..:|:.|....:.....:.|:..||::
 Worm    86 IFSRVWVFPAIFCKLIGVFQGGTIFVSSFTLTVIALDRCVLILRPNQEIVNFPRAVFIVFCIWLL 150

  Fly   189 ALLATVPYGMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMT 253
            .....:|.|:|..                                  |...|....|        
 Worm   151 GYSLALPVGIYSD----------------------------------IAVYDEICGT-------- 173

  Fly   254 AGSTGPEMPYVRVYCEENWPS-------EQYRKVFGAITTTLQFVLPFFIISICYVWIS-VKLNQ 310
                         :||||||.       ...|:.:|.....|||.:|..|.||||..|| |..:|
 Worm   174 -------------FCEENWPDFNPDTGRSGIRRAYGLSVLVLQFGIPALISSICYWMISRVMSDQ 225

  Fly   311 RARAKPGSKSSRREEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDDKSNEWRFYILFF 375
            .||.:..:.....|....:||.|.|||:|.||..|.|:|:|.|.||::.|....|   ::|...|
 Worm   226 LARRRGHNIRPESETKLVNRKTRANRMMIVMVVGFVLAWMPFNAVNLYRDLFGIS---KWYSTVF 287

  Fly   376 FVAHSIAMSSTCYNPFLYAWLNENFRK 402
            .:.|..||.|...||.:|:|.|..||:
 Worm   288 ALCHVCAMCSAVLNPIIYSWFNPQFRQ 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 39/120 (33%)
7tm_1 80..393 CDD:278431 94/320 (29%)
npr-3NP_502162.1 7tmA_NPYR-like 26..314 CDD:320331 103/345 (30%)
TM helix 1 28..52 CDD:320331 11/23 (48%)
TM helix 2 61..83 CDD:320331 8/21 (38%)
TM helix 3 99..121 CDD:320331 9/21 (43%)
TM helix 4 142..158 CDD:320331 3/15 (20%)
TM helix 5 193..216 CDD:320331 9/22 (41%)
TM helix 6 247..272 CDD:320331 13/24 (54%)
TM helix 7 284..309 CDD:320331 9/24 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163619
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1072979at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102619
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.750

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