DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and npr-1

DIOPT Version :9

Sequence 1:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_508816.1 Gene:npr-1 / 180752 WormBaseID:WBGene00003807 Length:457 Species:Caenorhabditis elegans


Alignment Length:483 Identity:134/483 - (27%)
Similarity:205/483 - (42%) Gaps:135/483 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 FYVLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGRWA 130
            |..:|..:|.||:||||.:.||...::|:.:|.||||.|||.||.::|:|::|.||:......|.
 Worm    29 FLTVYLFLFFLGLFGNVTLIYVTCSHKALLSVQNIFILNLAASDCMMCILSLPITPITNVYKNWY 93

  Fly   131 FGRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIGIIVSIWVIALLATVP 195
            ||..||||:...||.||::.|.:|.:||:|||.:::.|....:.........|.:|:::.:.|:|
 Worm    94 FGNLLCHLIPCIQGISIFVCTFSLGAIALDRYILVVRPHSTPLSQRGAFLTTVLLWILSFVVTLP 158

  Fly   196 YGMYMKM---TNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGST 257
            |...|:|   |.|.:.|                                                
 Worm   159 YAFNMQMIEYTEERICG------------------------------------------------ 175

  Fly   258 GPEMPYVRVYCEENWPSEQYRKVFGAITTTLQFVLPFFIISICYVWISVKLNQRARAKPGSKSSR 322
                    .:|.|.|.|.:.|:.:..|....|||:||.:::.||..|...|::||:.|......|
 Worm   176 --------YFCTEKWESAKSRRAYTMIVMLAQFVVPFAVMAFCYANIVSVLSKRAQTKIRKMVER 232

  Fly   323 ---------------------------REEADRDR----KKRTNRMLIAMVAVFGLSWLPINVVN 356
                                       ::|.::.|    .:||..:|:.||..||::|||.||::
 Worm   233 TSALESSCAFPSHGLEQYENELNEFLDKQEKEKQRVVLQNRRTTSILVTMVVWFGITWLPHNVIS 297

  Fly   357 IFDDFDDKSNEWRFY--------ILFFFVAHSIAMSSTCYNPFLYAWLNENFRKEFKHVLPCF-- 411
            :..::||..:.:|.|        .|.....||||||:...||.||||||.:||   :.|:..:  
 Worm   298 LIIEYDDTQSFFRLYGRDDYDISYLLNLFTHSIAMSNNVLNPVLYAWLNPSFR---QLVIKTYFG 359

  Fly   412 -NPSNNNIINITRGYNRS---DRNTCGPRLHHGKGDGGMGGGSLDADDQDE------------NG 460
             ...::.|||.|..|...   |......|...|      ||||.:|..:.|            ||
 Worm   360 DRRKSDRIINQTSVYKTKIVHDTKHLNGRAKIG------GGGSHEALKERELNSCSENLSYHVNG 418

  Fly   461 ITQ---------ETCLPK-EKLLIIPRE 478
            .|:         |...|: .||:..|.|
 Worm   419 HTRTPTPEVQLNEVSSPEISKLVAEPEE 446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 46/120 (38%)
7tm_1 80..393 CDD:278431 96/354 (27%)
npr-1NP_508816.1 7tmA_NPYR-like 27..351 CDD:320331 110/380 (29%)
TM helix 1 29..53 CDD:320331 11/23 (48%)
TM helix 2 62..84 CDD:320331 12/21 (57%)
TM helix 3 100..122 CDD:320331 9/21 (43%)
TM helix 4 143..159 CDD:320331 3/15 (20%)
TM helix 5 189..212 CDD:320331 7/22 (32%)
TM helix 6 273..298 CDD:320331 12/24 (50%)
TM helix 7 321..346 CDD:320331 13/24 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24235
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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