DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and Gpr83

DIOPT Version :9

Sequence 1:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_536336.1 Gene:Gpr83 / 140595 RGDID:619891 Length:422 Species:Rattus norvegicus


Alignment Length:425 Identity:132/425 - (31%)
Similarity:203/425 - (47%) Gaps:96/425 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SSISTSQLPLVSTTNWSLTSPGT---TSAILADVAASD------EDRSGGIIHNQFVQIFFYVLY 70
            ||:..::.|.|.|.:.|:.:..|   .|...|:...||      ..|.|....|..|:....|.|
  Rat    13 SSVRATEQPQVVTEHPSMDAALTGANASHFWANYTFSDWQNFVGRRRYGAESQNPTVKALLIVAY 77

  Fly    71 ATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFMGRWAFGRSL 135
            :.:.|..:|||||||:|:.:|:.|.:.|::||.|||::||::.:|..|||.:......|.||:.:
  Rat    78 SFIIVFSLFGNVLVCHVIFKNQRMHSATSLFIVNLAVADIMITLLNTPFTLVRFVNSTWVFGKGM 142

  Fly   136 CHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIGIIVSIWVIALLATVPYGMYM 200
            ||:..|||.||:::|.||||:||:||:.||::|..||:.::..:..|..|||:|...::|:.:..
  Rat   143 CHVSRFAQYCSLHVSALTLTAIAVDRHQVIMHPLKPRISITKGVIYIAVIWVMATFFSLPHAICQ 207

  Fly   201 KMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGSTGPEMPYVR 265
            |:.      |...:|.:|.:..:                                   |:.|.  
  Rat   208 KLF------TFKYSEDIVRSLCL-----------------------------------PDFPE-- 229

  Fly   266 VYCEENWPSEQYRKVFGAITTTLQFVLPFFIISICYVWISVKL---NQRARAKPGSKSSRREEAD 327
                   |::.:.|.....|..|.::||.||||:.|..::.||   |     ..|..::.:..|.
  Rat   230 -------PADLFWKYLDLATFILLYLLPLFIISVAYARVAKKLWLCN-----TIGDVTTEQYLAL 282

  Fly   328 RDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDDKSNEWRFYIL------------FFFVAHS 380
            |.:||.|.:||:.:|.:|.|.|.|:|.                |:|            .:|..|.
  Rat   283 RRKKKTTVKMLVLVVVLFALCWFPLNC----------------YVLLLSSKAIHTNNALYFAFHW 331

  Fly   381 IAMSSTCYNPFLYAWLNENFRKEFKHVLP-CFNPS 414
            .||||||||||:|.|||||||.|.|.:|. |..||
  Rat   332 FAMSSTCYNPFIYCWLNENFRVELKALLSMCQRPS 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 52/120 (43%)
7tm_1 80..393 CDD:278431 99/327 (30%)
Gpr83NP_536336.1 7tm_4 77..>224 CDD:304433 58/152 (38%)
7tm_1 87..344 CDD:278431 99/327 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E33208_3BIJ1
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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