DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and gpr83.2

DIOPT Version :9

Sequence 1:NP_001262086.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:XP_002939760.1 Gene:gpr83.2 / 100486806 XenbaseID:XB-GENE-993677 Length:423 Species:Xenopus tropicalis


Alignment Length:448 Identity:138/448 - (30%)
Similarity:205/448 - (45%) Gaps:81/448 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LSWLSTITTTSSSISTSQLPLVSTTNWSLTSPGTTSAI------LAD-VAASDEDRSGGIIHNQF 61
            |.||..:..:|....:..|...::...|...|..|...      ||| .:...:.|.|....|..
 Frog     5 LMWLFLLCLSSGLKRSESLHSNASLKGSFQIPNITGFFSWNNYSLADWQSFVGKKRYGAESQNPM 69

  Fly    62 VQIFFYVLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALSDILLCVLAVPFTPLYTFM 126
            |:....|.|:.:.|..:|||||||:||::|:.|.:.|::||.|||::|||:.:|..|||......
 Frog    70 VKALLIVAYSFIIVFSLFGNVLVCHVVIKNKRMHSATSLFIVNLAVADILITLLNTPFTLARFVN 134

  Fly   127 GRWAFGRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRMKLSTCIGIIVSIWVIALL 191
            ..|.||:.:||:..|||.||:::|.||||:||:||:.||::|..||:.....:..|..||::|..
 Frog   135 STWMFGKGMCHVSRFAQYCSLHVSALTLTAIAVDRHQVIMHPLKPRISTVKGVAYIAIIWIMATC 199

  Fly   192 ATVPYGMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEAPDSTSATQAYMQVMTAGS 256
            .::|:.:|.|:                                         .|..|.:......
 Frog   200 FSLPHAIYQKL-----------------------------------------FTFEYSEENIRSL 223

  Fly   257 TGPEMPYVRVYCEENWPSEQYRKVFGAITTTLQFVLPFFIISICYVWISVKLNQRARAKPGSKSS 321
            ..|:.|.         ||:.:.|.....|..|.:|||..|||:.|..::.||  ..|...|..::
 Frog   224 CLPDFPE---------PSDLFWKYLDLATFILLYVLPLLIISVAYTTVAKKL--WLRNAIGDVTT 277

  Fly   322 RREEADRDRKKRTNRMLIAMVAVFGLSWLPIN--VVNIFDDFDDKSNEWRFYILFFFVAHSIAMS 384
            .:..|.|.:||:|.:||:.:|.:|.:.|.|:|  ||.:      .|...|.....:|..|..|||
 Frog   278 EQYFALRRKKKKTIKMLMLVVVLFAVCWFPLNCYVVLL------SSQTIRTNNALYFAFHWFAMS 336

  Fly   385 STCYNPFLYAWLNENFRKEFK--------------HVLPCFNPSNNNIINITRGYNRS 428
            |||||||:|.|||:|||.|.|              |:||...||........|.:.||
 Frog   337 STCYNPFIYCWLNDNFRSELKALLNMCKKPTGPSEHMLPSSVPSYRVAWPENRSFKRS 394

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_001262086.1 7tm_4 75..>196 CDD:304433 53/120 (44%)
7tm_1 80..393 CDD:278431 102/314 (32%)
gpr83.2XP_002939760.1 7tmA_GPR83 72..356 CDD:320511 113/341 (33%)
TM helix 1 73..99 CDD:320511 12/25 (48%)
TM helix 2 106..131 CDD:320511 13/24 (54%)
TM helix 3 144..174 CDD:320511 17/29 (59%)
TM helix 4 185..206 CDD:320511 5/20 (25%)
TM helix 5 236..265 CDD:320511 10/28 (36%)
TM helix 6 285..315 CDD:320511 12/29 (41%)
TM helix 7 324..349 CDD:320511 14/24 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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