DRSC/TRiP Functional Genomics Resources

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Protein Alignment sNPF-R and tacr2

DIOPT Version :10

Sequence 1:NP_524176.1 Gene:sNPF-R / 40195 FlyBaseID:FBgn0036934 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_001314788.1 Gene:tacr2 / 100002125 ZFINID:ZDB-GENE-090312-188 Length:376 Species:Danio rerio


Alignment Length:369 Identity:90/369 - (24%)
Similarity:151/369 - (40%) Gaps:77/369 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 DEDRSGGIIHNQFVQ-----IFFYVLYATVFVLGVFGNVLVCYVVLRNRAMQTVTNIFITNLALS 108
            |||.:...| |.|.|     ..:.:.|..:.::...|||.|.:::|.::.|:||||.||.|||.|
Zfish    16 DEDGNETSI-NLFEQPDWQVALWAIAYTLIVIISFIGNVTVIWIILAHKRMRTVTNYFIVNLAFS 79

  Fly   109 DILLCVLAVPFTPLYTFMGRWAFGRSLCHLVSFAQGCSIYISTLTLTSIAIDRYFVIIYPFHPRM 173
            |..:......|..:|.....|.||...|...:|....:::.|..::.:||:|||..||:|..||:
Zfish    80 DASMATFNTVFNFVYALHNDWYFGLGYCKFQNFFPITAMFSSIYSMAAIAVDRYMAIIHPLKPRL 144

  Fly   174 KLSTCIGIIVSIWVIALLATVPYGMYMKMTNELVNGTQTGNETLVEATLMLNGSFVAQGSGFIEA 238
            ..:|...:|..||.:|.....|...|                                       
Zfish   145 SSTTTKLLIGVIWTVAFSLAFPQCYY--------------------------------------- 170

  Fly   239 PDSTSATQAYMQVMTAGSTGPEMPYVRVYCEENWPSE---QYRKVFGAITTTLQFVLPFFIISIC 300
                ::|:.|              :.|..|...||.:   :::..:......|.::||..::.:.
Zfish   171 ----ASTKFY--------------FPRTVCMVEWPDDYGGKHQLSYQIAVIILIYLLPLLVMLVT 217

  Fly   301 YVWISVKLNQRARAKPGSKSSRREEADRDRKKRTNRMLIAMVAVFGLSWLPINVVNIFDDFDDKS 365
            |..:..:|  .....||..|...:. ....|::..:|:|.:|..|.:.|||.::..|...|:...
Zfish   218 YSLVGQRL--WGSEIPGEASDHYQN-QMQAKRKVVKMMIVVVTTFAICWLPYHIYFILGSFNRDI 279

  Fly   366 NEWRF----YILFFFVAHSIAMSSTCYNPFLYAWLNENFRKEFK 405
            .:..:    |:..|:    :|||||.|||.:|..||:.||..|:
Zfish   280 YKQHYIQQVYLAIFW----LAMSSTMYNPIIYCCLNQRFRSGFR 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
sNPF-RNP_524176.1 7tmA_NPYR-like 64..404 CDD:320331 82/346 (24%)
TM helix 1 65..91 CDD:320331 6/25 (24%)
TM helix 2 98..123 CDD:320331 10/24 (42%)
TM helix 3 136..166 CDD:320331 8/29 (28%)
TM helix 4 177..198 CDD:320331 6/20 (30%)
TM helix 5 278..307 CDD:320331 4/28 (14%)
TM helix 6 329..359 CDD:320331 9/29 (31%)
TM helix 7 372..397 CDD:320331 10/24 (42%)
tacr2NP_001314788.1 7tm_GPCRs 35..318 CDD:475119 82/346 (24%)
TM helix 1 37..61 CDD:320670 5/23 (22%)
TM helix 2 70..92 CDD:320670 9/21 (43%)
TM helix 3 108..130 CDD:320670 3/21 (14%)
TM helix 4 151..167 CDD:320670 4/15 (27%)
TM helix 5 196..219 CDD:320670 3/22 (14%)
TM helix 6 249..271 CDD:320670 7/21 (33%)
TM helix 7 286..311 CDD:320670 11/28 (39%)

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