DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14183 and MSP1

DIOPT Version :10

Sequence 1:NP_649172.3 Gene:CG14183 / 40192 FlyBaseID:FBgn0036931 Length:872 Species:Drosophila melanogaster
Sequence 2:NP_011542.3 Gene:MSP1 / 852915 SGDID:S000003260 Length:362 Species:Saccharomyces cerevisiae


Alignment Length:270 Identity:62/270 - (22%)
Similarity:103/270 - (38%) Gaps:49/270 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   584 TRDEDGLT-----TLGPAKGDI-KMVIQESMLGMGEFDVP---KPKSLLLIGPLNSGKRLLCEII 639
            |.||..:|     .|.|...|: :.||...|:.....:.|   .|..:||.||...||.:|.:.:
Yeast    82 TPDEINITFQDIGGLDPLISDLHESVIYPLMMPEVYSNSPLLQAPSGVLLYGPPGCGKTMLAKAL 146

  Fly   640 ASELDAVFMNLSPENTY-KYAKDLKYFLHVILKVAKAFQPTIMYIEEAHRLFWKKVPPEAVEINP 703
            |.|..|.|:::...:.. |:..:....:..:..:|...||.|::|:|... |.::......|:..
Yeast   147 AKESGANFISIRMSSIMDKWYGESNKIVDAMFSLANKLQPCIIFIDEIDS-FLRERSSTDHEVTA 210

  Fly   704 RLLGTSLASKILKPLKKNDKIVLVGTSNMPWAANGGIKRAFQKVLLI--PKCDYGTSFLLWL--- 763
            .|....:.  :...|..|.:::::|.:|.....:....|...|..|:  |..|.....|..|   
Yeast   211 TLKAEFMT--LWDGLLNNGRVMIIGATNRINDIDDAFLRRLPKRFLVSLPGSDQRYKILSVLLKD 273

  Fly   764 --------------------------ELMTENAPDDMKEYAYSALARVLQAYNSGDIDDNVKETL 802
                                      ||..|.|.|..|||    :.:..|..:||.||.|...:|
Yeast   274 TKLDEDEFDLQLIADNTKGFSGSDLKELCREAALDAAKEY----IKQKRQLIDSGTIDVNDTSSL 334

  Fly   803 NIDRKMRLKN 812
            .| |.::.|:
Yeast   335 KI-RPLKTKD 343

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14183NP_649172.3 Adgb_C_mid-like <201..>278 CDD:412094
globin helix H 201..232 CDD:412094
IQCD 247..278 CDD:467745
IQ motif 259..277 CDD:412094
P-loop containing Nucleoside Triphosphate Hydrolases 617..750 CDD:476819 29/136 (21%)
MSP1NP_011542.3 RecA-like_ATAD1 92..255 CDD:410928 35/165 (21%)
AAA_lid_3 280..319 CDD:465537 8/42 (19%)
Blue background indicates that the domain is not in the aligned region.

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