DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14183 and SEC18

DIOPT Version :9

Sequence 1:NP_649172.3 Gene:CG14183 / 40192 FlyBaseID:FBgn0036931 Length:872 Species:Drosophila melanogaster
Sequence 2:NP_009636.3 Gene:SEC18 / 852372 SGDID:S000000284 Length:758 Species:Saccharomyces cerevisiae


Alignment Length:745 Identity:145/745 - (19%)
Similarity:262/745 - (35%) Gaps:212/745 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 RARVYKSNIKYDK----KKFLKVHQRKKINYKFTFKPDQAMSIPVKRTIFSADFLKADESCENLI 234
            |||....:..:|:    |:|::.::.:      .|.|.|.:.:..:...|.             :
Yeast   124 RARGKAVSTVFDQDELAKQFVRCYESQ------IFSPTQYLIMEFQGHFFD-------------L 169

  Fly   235 KKDDVADTAIDDEEALSAIQNNAACKIQSCWRGYKTRKIVKIRKRF-----KEELYGMKKIRKLK 294
            |..:|....:.|.|..||:..           |.:|:.|:..:.:.     ::.|..:|....| 
Yeast   170 KIRNVQAIDLGDIEPTSAVAT-----------GIETKGILTKQTQINFFKGRDGLVNLKSSNSL- 222

  Fly   295 RPNQTANSIMEMYKNEML-KKKLDEDFINLINDERTRLLQFRSPWMMEDIS-DHIRAWFKEFYDA 357
            ||...| .|...:|.|.| ...||::|..:.  .|....:...|.::|.:. .|::....     
Yeast   223 RPRSNA-VIRPDFKFEDLGVGGLDKEFTKIF--RRAFASRIFPPSVIEKLGISHVKGLLL----- 279

  Fly   358 TGNFHPYPDPVKQGTVLVVIDETMTPMEFQESLGKKPLSKAELKKLRDKE--KKEKRKKKEKLKQ 420
                  |..|   ||...:|...:..|          |:..|.|.:...|  .|.....:|.::.
Yeast   280 ------YGPP---GTGKTLIARKIGTM----------LNAKEPKIVNGPEILSKYVGSSEENIRN 325

  Fly   421 L-KMKEAKRRKKLRDAGVIDIGYELTASKAIENIEETMKKYSK--DWRNVDEYLNKNHDPIKEWV 482
            | |..||:.|.|..::.:..|        ..:.::...|:...  |...|.:.           |
Yeast   326 LFKDAEAEYRAKGEESSLHII--------IFDELDSVFKQRGSRGDGTGVGDN-----------V 371

  Fly   483 TEEQLAKIH--QEVRGLVDEYMRVEYELLREALAKDNDEKYKALKVKYPKKK--------KEKRK 537
            ..:.|||:.  .::..::...|....:|:..||.:....:.: :::..|.:|        :.|:.
Yeast   372 VNQLLAKMDGVDQLNNILVIGMTNRKDLIDSALLRPGRFEVQ-VEIHLPDEKGRLQIFDIQTKKM 435

  Fly   538 KKPKDMTGDRTLESL------YNELKDAGIIEEIGHRDFDEFI------TDFNFVADDTRD---- 586
            ::...|:.|..|..|      ::..:..|:::.......::.:      |..|     |:|    
Yeast   436 RENNMMSDDVNLAELAALTKNFSGAEIEGLVKSASSFAINKTVNIGKGATKLN-----TKDIAKL 495

  Fly   587 ----EDGLTTLG---PAKG----DIKMVIQESML------------------GMGEFDVPKPKSL 622
                ||.|..|.   ||.|    |:|..::..|:                  .:.|.|..:..||
Yeast   496 KVTREDFLNALNDVTPAFGISEEDLKTCVEGGMMLYSERVNSILKNGARYVRQVRESDKSRLVSL 560

  Fly   623 LLIGPLNSGKRLLCEIIASELDAVFMNL-SPENTYKYAKDLKYFLHVILKVAKAFQPTIMYIEEA 686
            |:.||..|||..|...||.:....|:.| ||......::..|                |.||:..
Yeast   561 LIHGPAGSGKTALAAEIALKSGFPFIRLISPNELSGMSESAK----------------IAYIDNT 609

  Fly   687 HRLFWK-----------KVPPEAVEINPRLLGTSLASKILKPLK-------KNDKIVLVGTSNMP 733
            .|..:|           :...:.|.|.||     .::.||:.||       ..|:.:|:.|:...
Yeast   610 FRDAYKSPLNILVIDSLETLVDWVPIGPR-----FSNNILQMLKVALKRKPPQDRRLLIMTTTSA 669

  Fly   734 WAA--NGGIKRAFQKVLLIPKCDYGTSFLLWLELMTE-NAPDDM-KEYAYSALARVLQAYNSGDI 794
            ::.  ...|...|...:.:|..   |:......:|.| |..||. :....:.|:|....:|.|  
Yeast   670 YSVLQQMDILSCFDNEIAVPNM---TNLDELNNVMIESNFLDDAGRVKVINELSRSCPNFNVG-- 729

  Fly   795 DDNVKETL-NIDRKMRLKNEALDP-NEFLE 822
               :|:|| ||:.....:    || ||.:|
Yeast   730 ---IKKTLTNIETARHDE----DPVNELVE 752

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14183NP_649172.3 AAA 622..751 CDD:278434 33/149 (22%)
SEC18NP_009636.3 CDC48_N 29..98 CDD:215012
CDC48_2 134..204 CDD:215011 16/99 (16%)
RecA-like_NSF-SEC18_r1-like 240..416 CDD:410912 37/221 (17%)
SpoVK 263..758 CDD:223540 112/572 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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