DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14183 and CDC48

DIOPT Version :9

Sequence 1:NP_649172.3 Gene:CG14183 / 40192 FlyBaseID:FBgn0036931 Length:872 Species:Drosophila melanogaster
Sequence 2:NP_010157.1 Gene:CDC48 / 851431 SGDID:S000002284 Length:835 Species:Saccharomyces cerevisiae


Alignment Length:645 Identity:120/645 - (18%)
Similarity:214/645 - (33%) Gaps:233/645 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   235 KKDD--VADTAIDDEEALSAIQNNAACKIQSCWRGYKTRKIVKIRKRFKEELYGMKKIRKLKRPN 297
            |||:  :.|.||:|:.::.||.:|...|                                     
Yeast    31 KKDNMLLVDDAINDDNSVIAINSNTMDK------------------------------------- 58

  Fly   298 QTANSIMEMYKNEML----KKKLDEDFINLINDERTRLLQFRSPWMMED--------ISDHIRAW 350
                  :|:::.:.:    ||:.|...|.||:||            :||        :.:::|..
Yeast    59 ------LELFRGDTVLVKGKKRKDTVLIVLIDDE------------LEDGACRINRVVRNNLRIR 105

  Fly   351 FKEFYDATGNFHPYPDPVKQGT---VLVVID--ETMTPMEFQESLGKKPLSKAELKKLRDKEKKE 410
            ..:..    ..||.|| :|..|   ||.:.|  |.:|...|...|  ||..   ::..|...|.:
Yeast   106 LGDLV----TIHPCPD-IKYATRISVLPIADTIEGITGNLFDVFL--KPYF---VEAYRPVRKGD 160

  Fly   411 KRKKKEKLKQLKMKEAKRRKKLRDAGVIDIGYELTASKAIENIEETMKKYSKDWRNVDEYLNKNH 475
            ....:..::|::.|            |:|:                         ..:||.....
Yeast   161 HFVVRGGMRQVEFK------------VVDV-------------------------EPEEYAVVAQ 188

  Fly   476 DPIKEWVTEEQLAKIHQEVRGLVDEYMRVEYELLREALAKDNDEKYKALKVKYPKKKKEKRKKKP 540
            |.|..|..|    .|::|                        ||:....:|.|            
Yeast   189 DTIIHWEGE----PINRE------------------------DEENNMNEVGY------------ 213

  Fly   541 KDMTGDRTLESLYNELKDAGIIEEIGHRDFDEFITDFNFVADDTRDEDGLTTLGPAKGDIKMVIQ 605
            .|:.|.|         |....|.|:                                  :::.::
Yeast   214 DDIGGCR---------KQMAQIREM----------------------------------VELPLR 235

  Fly   606 ESMLGMGEFDVPKPKSLLLIGPLNSGKRLLCEIIASELDAVFMNLS-PENTYKYAKDLKYFLHVI 669
            ...| .....:..|:.:|:.||..:||.|:...:|:|..|.|..:: ||...|.|.:.:..|...
Yeast   236 HPQL-FKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKA 299

  Fly   670 LKVAKAFQPTIMYIEEAHRLFWKKVPPEAVEINPRLLGTSLASKILKPLKKNDKIVLVGTSNMPW 734
            .:.|:...|.|::|:|...:..|:..... |:..|::...|.  ::..:|....:|::..:|.|.
Yeast   300 FEEAEKNAPAIIFIDEIDSIAPKRDKTNG-EVERRVVSQLLT--LMDGMKARSNVVVIAATNRPN 361

  Fly   735 AANGGIKR--AFQKVLLIPKCDYG----TSFLLWLELMTEN--APDDMKEYAYSALARVLQAYNS 791
            :.:..::|  .|.:     :.|.|    |..|..|.:.|:|  ..||:.   ..|||.....|..
Yeast   362 SIDPALRRFGRFDR-----EVDIGIPDATGRLEVLRIHTKNMKLADDVD---LEALAAETHGYVG 418

  Fly   792 GDIDDNVKETLNIDRKMRLKNEALDPNEFLEYFLSKNEPPIFPPDEKIMDKFNKWFGSSN 851
            .||.....|...  :::|.|.:.:|.:|      .:.:..:.......||.|....|:||
Yeast   419 ADIASLCSEAAM--QQIREKMDLIDLDE------DEIDAEVLDSLGVTMDNFRFALGNSN 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14183NP_649172.3 AAA 622..751 CDD:278434 30/131 (23%)
CDC48NP_010157.1 CDC48 48..785 CDD:273521 113/628 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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