DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14183 and Afg2b

DIOPT Version :10

Sequence 1:NP_649172.3 Gene:CG14183 / 40192 FlyBaseID:FBgn0036931 Length:872 Species:Drosophila melanogaster
Sequence 2:NP_001103117.1 Gene:Afg2b / 691729 RGDID:1595990 Length:747 Species:Rattus norvegicus


Alignment Length:374 Identity:75/374 - (20%)
Similarity:135/374 - (36%) Gaps:93/374 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   473 KNHDPIKEWVTEEQLAKIHQEVRGLVDEYMRVEY------ELLREALAKDNDEKYKALKVKYPKK 531
            |..:.|...:|.:.....|.:: ||:.| |.|.|      .|.|||..       .||      .
  Rat   367 KQREAILGVITSKMPISSHIDL-GLLAE-MTVGYVGADLTALCREAAT-------CAL------L 416

  Fly   532 KKEKRKKKPKDMTGDRTLESLYNELKDAGIIEEIGHRDFDEFITDFNFVADDT-RDEDGLTTLGP 595
            |.||.:..||                    |||      .:|:..|..|...: |...|||.:.|
  Rat   417 KNEKNQNNPK--------------------IEE------TDFLEAFKKVQPSSFRSSIGLTDIRP 455

  Fly   596 -------AKGDIKMVIQ----------ESMLGMGEFDVPKPKSLLLIGPLNSGKRLLCEIIASEL 643
                   ...|:|:.::          :....||   :.:||.|||.||....|..|...:|:..
  Rat   456 VGWEQIGGLEDVKLKLKQCVEWPLKFPQEFARMG---LTQPKGLLLYGPPGCAKTTLVRALATSC 517

  Fly   644 DAVFMNLSPENTYK-YAKDLKYFLHVILKVAKAFQPTIMYIEEAHRLFW-KKVPPEAVEINPRLL 706
            ...|:::...:.:. :..|.:..|..:.:.|:|..|.:::::|...:.. :.|.....:...|:|
  Rat   518 HCSFVSVCGADLFSPFVGDSEKVLSQVFRQARANTPALVFLDEIDSVLGSRSVGSSGCDARERVL 582

  Fly   707 ------------------GTSLASKILKPLKKNDKIVLVGTSNMPWAANGGIKR--AFQKVLLIP 751
                              |:..:.:..:.:.....:::|.| |.|...:..:.|  ...|::.:|
  Rat   583 SVLLNELDGVGVRTVERRGSKASQQECQEILSRSVMIVVAT-NRPDVLDDALLRPGRLDKMVYVP 646

  Fly   752 KCDYGTSFLLWLELMTENAPDDMKEYAYSALARVLQAYNSGDIDDNVKE 800
            ..| ....|..|::.|.|.|..: ..:...||.....::..|:.:..||
  Rat   647 PPD-REGRLSILKVCTNNMPIGL-NVSLENLAAETCYFSGADLRNLCKE 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14183NP_649172.3 Adgb_C_mid-like <201..>278 CDD:412094
globin helix H 201..232 CDD:412094
IQCD 247..278 CDD:467745
IQ motif 259..277 CDD:412094
P-loop containing Nucleoside Triphosphate Hydrolases 617..750 CDD:476819 27/154 (18%)
Afg2bNP_001103117.1 CDC48 14..738 CDD:273521 75/374 (20%)
Blue background indicates that the domain is not in the aligned region.

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