DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14183 and pch2

DIOPT Version :9

Sequence 1:NP_649172.3 Gene:CG14183 / 40192 FlyBaseID:FBgn0036931 Length:872 Species:Drosophila melanogaster
Sequence 2:NP_001287235.1 Gene:pch2 / 41013 FlyBaseID:FBgn0051453 Length:421 Species:Drosophila melanogaster


Alignment Length:451 Identity:91/451 - (20%)
Similarity:155/451 - (34%) Gaps:149/451 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   509 LREALAKDNDEKYKALKVKYPKKKKEKRKKK--PKDMTGDRTLESLYNEL--KDAGIIEEIGHRD 569
            ||....::|.|  .|||..:...:|..|...  | |:|.::| |.:::.|  :|.|.::.:...:
  Fly    21 LRSNAIRNNVE--TALKAYFQTARKLPRNVSFLP-DLTAEQT-EHVHSVLLERDNGGVQPLKVAE 81

  Fly   570 FDEFITDFNFVADDTRDEDGLTTLGPAKGD----------------------------------- 599
                 |.|.|....||.|:|  .||...|:                                   
  Fly    82 -----TKFRFHFYATRPEEG--QLGLFSGEEGSDGIDSIVAASHALLPAAQFVGLWENLIYETGL 139

  Fly   600 ----IKMVIQESMLGMGEFD---VPKPKSLLLIGPLNSGKRLLCEIIASELDAVFMNLSPENTYK 657
                :|..:...|......|   :...:.:||.||..:||..||:.:|.:|     ::..:.:|.
  Fly   140 KEKLLKFALSALMFSEHRVDTNVIACNRLILLHGPPGTGKTSLCKALAQKL-----SIRTQGSYA 199

  Fly   658 YAKDLKYFLHVILK---------VAKAFQP-----------TIMYIEEAHRLFWKK------VPP 696
            |...::...|.:..         ||:.|..           ..:.|:|...|.:.:      .|.
  Fly   200 YTHLVEINSHSLFSKWFSESGKLVAQLFNKIAELVSDPNNLVCVLIDEVESLAYARSAMSSNEPR 264

  Fly   697 EAVEINPRLLGTSLASKILKPLKKNDKIVLVGTSNMPWAANGGIKRAFQKVLLIPKCDY------ 755
            :|:.:...:| |.|.|     ||....::::.|||:..:    |..||     :.:.|.      
  Fly   265 DAMRVVNAVL-TQLDS-----LKTCPNVLILATSNLAQS----IDLAF-----VDRADIRLFIGY 314

  Fly   756 -GTSFL------LWLELMTENAPDDMKEYAYSALARVLQ--AYNSGDIDDNVKETLNIDRKMRLK 811
             |.|.:      :..|||:               |.|||  ...|.|.::.:...| .:|.:.|.
  Fly   315 PGISAIREIYKGMLAELMS---------------AGVLQREVLESEDAEEGLLTQL-AERSVGLS 363

  Fly   812 NEALDPNEFLEYFLSKNEPPIFPPDEKI-----MDKFNKWFGSSNKLEKLRKSYMAQKLAK 867
            ...|.....|.: .......:|..|:||     :|..         ||.|.:....|:|.|
  Fly   364 GRTLRKLPLLAH-AQYTSSTLFELDQKISLSDFLDAM---------LEALEQHLGEQRLLK 414

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14183NP_649172.3 AAA 622..751 CDD:278434 33/154 (21%)
pch2NP_001287235.1 AAA 166..315 CDD:214640 34/168 (20%)
AAA 169..314 CDD:278434 34/164 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0464
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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