DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14183 and Iqca1

DIOPT Version :9

Sequence 1:NP_649172.3 Gene:CG14183 / 40192 FlyBaseID:FBgn0036931 Length:872 Species:Drosophila melanogaster
Sequence 2:XP_017452394.2 Gene:Iqca1 / 316616 RGDID:1305311 Length:836 Species:Rattus norvegicus


Alignment Length:943 Identity:254/943 - (26%)
Similarity:449/943 - (47%) Gaps:178/943 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSFDLNHKFWVYTRKEIGKLIKKQNRLKKIEPPEEKAVSYKIYAELYVLYVELVNKLSFIYHNTF 65
            ||..:.:..|..|::.:..|:.|::: |..||.:.|.:.:::.|..|:.||::...:..:|....
  Rat     1 MSNLMYNNMWHQTQEALNSLLDKESQ-KMTEPQKNKVLVFQMLATFYIKYVQIFRNMENVYDQIV 64

  Fly    66 QVQKRALVRVLVENATQQLMQLKEELKDLEMSEYIYIDKALIARKLTPRDLVVWRSPQFLYRRPL 130
            ..|||.|:|.:::....::::||.|:.:|||:|:.|.|..|...||:|:.|.| ..|::..:..|
  Rat    65 HPQKRMLIRKILDGVMGRILELKNEMVELEMTEFHYFDDILQDMKLSPQQLDV-PIPRYFLKERL 128

  Fly   131 DI--------QNIIADNRLYMNDEEKEEKAAQDWVPISEAVKLIQAHERARRARVYKSNIKYDKK 187
            ::        ..|:.:..|.:.|.:...|:    :.:.||||:||..||||:.|:   ...:.|:
  Rat   129 EVIKGREKTLARILDECGLNLPDVKYAVKS----IALEEAVKMIQIAERARQGRL---RAMFMKQ 186

  Fly   188 KFL---KVHQRKKINYKFTFKPDQAMSIPVKRTIFSADFLKADESCENLIKKDDVADTAIDDEEA 249
            .||   :..:.|.:.:|                                     ::||.:     
  Rat   187 IFLQECRAREMKLLGHK-------------------------------------LSDTTL----- 209

  Fly   250 LSAIQNNAACKIQSCWRG-YKTRKIVKIRKRFKEEL--YGMKKIRKLKRP---NQTANSIMEMYK 308
                   ||.:||..||| |:.:|.||.|   :||:  .|||.      |   |:.:::|::..:
  Rat   210 -------AALQIQKVWRGFYQCKKTVKER---EEEMVFLGMKP------PPLFNEVSDAIVQSEQ 258

  Fly   309 NEMLK--------KKLDEDFINLINDERTRLLQFRSPWMMEDISDHIRAWFKEFYDATGNFHPYP 365
            ...|:        :|..|..:::..|  .|||:...  :.|.:.|.||.||.|..:.||.|..||
  Rat   259 VSNLRDELQLKHEQKYQEALVSIKED--LRLLEGAD--IKEHLQDQIRQWFIECRNLTGTFPEYP 319

  Fly   366 DPVKQGTVLV--------VIDETMTPMEFQESLGKKPLSKAELKKLRDKEKKEKRKKKEKLKQLK 422
            :..:.|:.::        ||::.:...|.:|...||       ||..:||.|.|:.||||.::..
  Rat   320 NEEEGGSAVIFSNKTPEQVIEDIIAAQEEEEKSKKK-------KKKEEKENKGKKVKKEKERKTV 377

  Fly   423 MKEAKRRKKLRDAGVIDIGYELTASKAIENIEETMKKYSKDWRNVDEYLN--KNHDPIKEWVTEE 485
            .||...:::       |..::::.|..::.:||....|...|.|.||..|  :::||  |.|.||
  Rat   378 TKEKAAKEE-------DEEWKMSPSLFLQLMEEGNSLYKDMWMNKDESWNFPQDYDP--ELVKEE 433

  Fly   486 QLAKIHQEVRGLVDEYMRVEYELLREALAKDNDEKYKALKVKYPKK----KKEKRKKKPKDMTGD 546
            :..::..|:|..|||.||.|.:.|:.|:.::.:.:.:..|.|...|    ::.||.||.||:|.|
  Rat   434 KRKELEMEIRVQVDELMRQELKNLKLAVNREIEPQPRLKKGKKQNKGRKGRRGKRGKKDKDLTAD 498

  Fly   547 RTLESLYNELKDAGIIEEIGHRDFDEFITDFNFVADDTRDEDGLTTLG-------PAKGDIKMVI 604
            ||:||||.||.:.|::.:.......::|.:::::.         |||.       |:..|::.:|
  Rat   499 RTIESLYQELVEEGLLIQALKVKLSDYIGEYSYLG---------TTLRQVAIEPMPSLLDVRQLI 554

  Fly   605 Q-ESMLGMGEFDV----PKPKSLLLIGPLNSGKRLLCEIIASELDAVFMNLSPEN---TYKYAKD 661
            . ..:|.:|..:|    |..|||||.||...||::|...|.:|..|...|||..|   .|.....
  Rat   555 TLYGILPLGSAEVHERAPLVKSLLLAGPPGVGKKMLVHAICTETGANLFNLSSSNIAGKYPGKTG 619

  Fly   662 LKYFLHVILKVAKAFQPTIMYIEEAHRLFWKKVPPEAVEINPRLLGTSLASKILKPLKKNDKIVL 726
            |:..:|::.|||:..||::::|::..:.|:||||.......|:.|...| .|:||.|:.:|:|::
  Rat   620 LQMMIHLVFKVARQLQPSVVWIQDTEKTFYKKVPQAEKRNEPKRLKKYL-PKLLKLLRPDDRILI 683

  Fly   727 VGTSNMPWAAN-GGIKRAFQKVLLIPKCDYGTSFLLWLELMTENAPDDMKEYAYSALARVLQAYN 790
            |||::.|:.|. ....|.:||::|:|:.||.:.::||.:::..|..:.......|.|::|...:.
  Rat   684 VGTTHRPFDAELQSFCRVYQKIILVPRPDYASRYVLWKQIILRNGGEVTNALNISCLSKVTDGFT 748

  Fly   791 SGDIDDNVKETLNIDRKMRLKNEALDPNEFLEYF-LSKNEPPIFPPDEKIMDKFNKWF------- 847
            .|.|...:||.|.   :.|::.:|..|...:|:. :..|..|::..:|   :.|..|:       
  Rat   749 QGQIVHVIKEVLT---ERRIRQQAHKPLTAIEFITMMTNMNPVYREEE---ESFKNWYAKTPLGR 807

  Fly   848 --------GSSNKLEKLRKSYMAQKLAKASKKK 872
                    |...:.||.:    .:|..|..|||
  Rat   808 KRVLSLTVGGGKEKEKDK----GKKGKKGKKKK 836

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14183NP_649172.3 AAA 622..751 CDD:278434 47/132 (36%)
Iqca1XP_017452394.2 CDC48 <420..758 CDD:273521 108/349 (31%)
P-loop_NTPase 549..708 CDD:422963 54/159 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D127946at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103079
Panther 1 1.100 - - O PTHR14690
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.